Sequence details bmy_12142 (Coding sequence)

Part of scaffold_707 (Scaffold)

For more information consult the page for scaffold_707 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HSPA9 ENSBTAG00000011419 (Cow)

Gene Details

Stress-70 protein, mitochondrial

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015172, Cow)

Protein Percentage 96.85%
cDNA percentage 95.5%
Ka/Ks Ratio 0.13985 (Ka = 0.0184, Ks = 0.1313)

HSPA9  (Minke Whale)

Gene Details

heat shock 70kDa protein 9 (mortalin)

External Links

Gene match (Identifier: BACU004110, Minke Whale)

Protein Percentage 96.63%
cDNA percentage 97.16%
Ka/Ks Ratio 0.56527 (Ka = 0.0248, Ks = 0.0438)

Additional orthologs identified in other species via the OPTIC pipeline.

HSPA9 (Human)   Hspa9 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 2022 bp    Location:444023..459742   Strand:+
Raw sequence 
>bmy_12142
ATGATAAGCGCCAGCCGAGCCGCAGTAGCCCGTCTTGTCGGCGCCGCAGCCTCCCGGGGCCCCACAGCAGCTCGCCACCAGGATGGCTGGAATGGCTTTAGTCATGAAGCTTTTAGAATTGTTTCAAGGCGGGACTATGCATCAGAAGCAATCAAGGGAGCAGTTGTTGGTATTGATTTGGGTACTACCAACTCCTGTGTGGCAGTTATGGAAGGTAAACAAGCAAAGGTGCTAGAGAATGCTGAAGGTGCCAGAACCACCCCTTCAGTTGTAGCCTTTACAGCAGATGGTGAGCGACTTGTTGGCATGCCGGCCAAGCGACAGGCTGTCACCAACCCAAACAACACATTCTATGCTACCAAGCGTCTCATTGGCCGGCGATATGATGACCCAGAAGTTCAAAAAGACATTAAAAATGTTCCTTTTAAAATTGTCCGTGCCTCTAATGGCGATGCCTGGGTTGAAGCTCATGGAAAACTCTATTCCCCAAGTCAGATTGGAGCATTTGTGTTGATGAAGATGAAAGAGACTGCAGAAGGGAAATCAAAAGACTACACATTAAGCTTTTGTGCCACTAAGGATGCTGGCCAGATATCTGGACTAAATGTGCTTCGGGTAATTAATGAACCCACAGCGGCTGCTCTGGCCTATGGTCTAGACAAATCAGAAGACAGAATCATTGCCGTATATGATTTAGGTGGTGGAACTTTTGATATTTCCATACTGGAAATTCAGAAAGGAGTATTTGAGGTGAAATCCACCAATGGAGACACTTTTTTAGGTGGTGAAGACTTTGACCAGGCCTTGCTGCGTCACATTGTGAAGGAGTTCAAAAGAGAGACAGGGGTTGATTTGACCAAAGACAACATGGCGCTTCAGAGGGTTCGGGAAGCCGCTGAGAAGGCCAAGTGTGAACTCTCTTCATCTGTGCAGACTGACATCAATTTGCCATACCTTACAATGGATGCTTCTGGACCCAAGCATTTGAATATGAAGCTGACCCGGGCTCAGTTTGAGGGGATTGTTACTGATCTAATCAGAAGGACCATAGCTCCATGCCAAAAAGCGATGCAAGATGCAGAAGTCAGCAAAAGTGACATAGGAGAAGTGATTCTGGTTGGTGGCATGACTAGGATGCCCAAGGTTCAGCAGACTGTGCAGGATCTCTTTGGCCGAGCCCCAAGTAAAGCTGTCAATCCTGATGAGGCTGTGGCCATTGGAGCTGCCATTCAGGGAGGTGTGTTGGCTGGTGATGTCACAGATGTGCTACTCTTGGATGTCACTCCCCTGTCTCTGGGTATTGAGACTCTGGGAGGTGTCTTCACCAAGCTTATTAACAGGAACACCACTATTCCAACCAAGAAGAGCCAGGTGTTTTCTACAGCTGCTGATGGACAGACTCAAGTGGAGATTAAAGTGTGTCAGGGTGAGAGAGAGATGGCTGGAGACAACAAACTTCTTGGACAGTTTACTTTGATTGGGATTCCCCCAGCCCCTCGAGGAGTTCCTCAGATTGAAGTTACATTTGACATTGATGCCAATGGGATTGTACATGTTTCTGCCAAAGATAAGGGTACAGGACGCGAGCAGCAGATTATCAGTGTCACATTAACAGTTGTGATCCAGTCTTCCGGTGGGTTAAGCAAAGATGATATTGAAAATATGGTTAAAAATGCAGAGAAGTATGCTGAGGAAGACCGGCGAAAGAAGGAACGAGTTGAAGCAGTTAATATGGCTGAAGGAATCATTCATGACACAGAAACCAAGATGGAAGAATTCAAGGACCAATTGCCTGCTGATGAGTGCCACAAGCTAAAAGAAGAGATTTCCAAAATGAGGGAGCTCCTCGCTCGAAAAGACAGTGAAACAGGACAAAACATAAGAGAGGCAGCATCTTCCCTTCAGCAAGCATCATTGAAGCTCTTCGAAATGGCATACAAAAAGATGGCATCTGAGCGGGAAGGCTCTGGAAGTTCTGGCACTGGGGAGCAAAAGGAAGATCAAAAGGAAGAGAAACAGTAA

Related Sequences

bmy_12142T0 Protein

Length: 674 aa      View alignments
>bmy_12142T0
MISASRAAVARLVGAAASRGPTAARHQDGWNGFSHEAFRIVSRRDYASEAIKGAVVGIDLGTTNSCVAVMEGKQAKVLENAEGARTTPSVVAFTADGERLVGMPAKRQAVTNPNNTFYATKRLIGRRYDDPEVQKDIKNVPFKIVRASNGDAWVEAHGKLYSPSQIGAFVLMKMKETAEGKSKDYTLSFCATKDAGQISGLNVLRVINEPTAAALAYGLDKSEDRIIAVYDLGGGTFDISILEIQKGVFEVKSTNGDTFLGGEDFDQALLRHIVKEFKRETGVDLTKDNMALQRVREAAEKAKCELSSSVQTDINLPYLTMDASGPKHLNMKLTRAQFEGIVTDLIRRTIAPCQKAMQDAEVSKSDIGEVILVGGMTRMPKVQQTVQDLFGRAPSKAVNPDEAVAIGAAIQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIISVTLTVVIQSSGGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIHDTETKMEEFKDQLPADECHKLKEEISKMRELLARKDSETGQNIREAASSLQQASLKLFEMAYKKMASEREGSGSSGTGEQKEDQKEEKQ*