Sequence detailsbmy_12145 (Coding sequence)

Part of scaffold_707 (SequenceType object (1))

For more information consult the page for scaffold_707 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

EGR1ENSTTRG00000005503 (Bottlenosed dolphin)

Gene Details

early growth response 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000005188, Bottlenosed dolphin)

Protein Percentage 97.44%
cDNA percentage 96.91%
Ka/Ks Ratio 0.21922 (Ka = 0.0179, Ks = 0.0819)

EGR1ENSBTAG00000010069 (Cow)

Gene Details

early growth response protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000013284, Cow)

Protein Percentage 97.39%
cDNA percentage 94.91%
Ka/Ks Ratio 0.05365 (Ka = 0.0116, Ks = 0.2158)

EGR1 (Minke Whale)

Gene Details

early growth response 1

External Links

Gene match (Identifier: BACU004108, Minke Whale)

Protein Percentage 99.44%
cDNA percentage 99.32%
Ka/Ks Ratio 0.13583 (Ka = 0.0025, Ks = 0.0184)

Additional orthologs identified in other species via the OPTIC pipeline.

EGR1 (Human)   Egr1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1614 bp    Location:529539..526483   Strand:-
Raw sequence 
>bmy_12145
ATGGCGGCAGCCAAGGCCGAGATGCAGCTGATGTCCCCGCTGCAGATCTCCGACCCCTTTGGCTCCTTTCCTCATTCGCCCACCATGGACAACTACCCTAAGCTGGAAGAGATGATGCTGCTGAGCAATGGGGCTCCCCAGTTCCTCGGTGCCTCCGGGGCCCCGGAGGGCAGCGGCGGTAACAGCAGCAGCAGCGGGGGCGGTGGAGGTGGAGGGGGCGGCAGCAACAGCAGCGGCGGCGCCTTCAACCCTCAGGGGGAGGCGGGCGAGCAGCCCTACGAGCACCTGACCGCAGAGTCTTTTCCTGACATCACTCTGAATAACGAGAAGGTTCTAGTGGAGACGAGTTACCCCAGCCAAACCACCCGGCTGCCCCCCATCACCTACACTGGCCGCTTCTCTCTGGAACCTGCACCCAACAGTGGCAACACCTTATGGCCTGAGCCCCTCTTCAGCCTGGTCAGCGGCCTCGTTAGCATGACCAACCCCCCAGCCACCTCATCCTCAGCATCATCTCCAGCGGCCTCCTCCTCTGCCTCCCAGAGCCCACCCCTGAGCTGCGCAGTGCAGTCCAACGACAGCAGTCCTATTTACTCAGCGGCACCCACCTTCCCCACACCTAATACCGACATCTTTCCTGAGCCACAAGGTCAGGCCTTTCCAGGCTCAGCAGGCACCGCGCTTCAGTACCCACCTCCTGCCTACCCTGCTGCCAAGGGTGGCTTCCAGGTCCCCATGATCCCTGACTATCTGTTTCCACAACAGCAGGGGGACCTGGGCCTGGGCACCCCAGACCAGAAACCCTTCCAGGGCCTGGAGAGCCGTACCCAGCAGCCTTCGCTCACTCCACTCTCTACCATCAAGGCCTTTGCCACACAGTCGGGCTCCCAGGACCTGAARGCCCTCAACACCACCTACCAGTCCCAGCTCATCAAACCCAGCCGCATGCGCAAGTACCCCAACCGACCCAGCAAGACTCCCCCCCATGAACGCCCCTACGCCTGCCCCGTGGAGTCCTGTGACCGCCGCTTCTCTCGCTCAGATGAGCTCACCCGCCACATTCGCATCCACACCGGCCAGAAGCCCTTCCAGTGCCGCATCTGCATGCGCAACTTCAGCCGCAGCGACCACCTCACCACCCACATCCGCACCCACACAGGCGAGAAGCCATTCGCCTGTGACATCTGTGGGAGAAAGTTTGCCAGGAGTGATGAACGCAAGAGGCATACCAAAATCCACTTGCGGCAGAAGGACAAAAAAGCAGACAAAAGTGTGGCCTCTGCCGCTACCTCCTCTCTCCCTTCCTACCCATCCCCAGTGGCTACCTCCTACCCATCCCCAGTCACTACCTCTTACCCATCCCCAGCCACCACCTCATACCCATCACCCGTGCCCACCTCCTACTCCTCTCCCGGCTCCTCGACCTACCCATCGCCTGTGCACAGTGGTTTCCCGTCACCCTCCGTGGCCACCACATACTCCTCCGTTCCTCCTGCTTTCCCCGCCCAAGTCAGCAGCTTCCCTTCCTCAGCTGTCACCAACTCCTTCAGCGCCTCCACAGGGCTTTCGGACATGACGACCACGTTTTCTCCCAGGACAATTGAAATTTGCTAA

Related Sequences

bmy_12145T0 SequenceType object (3)

Length: 538 aa      View alignments
>bmy_12145T0
MAAAKAEMQLMSPLQISDPFGSFPHSPTMDNYPKLEEMMLLSNGAPQFLGASGAPEGSGGNSSSSGGGGGGGGGSNSSGGAFNPQGEAGEQPYEHLTAESFPDITLNNEKVLVETSYPSQTTRLPPITYTGRFSLEPAPNSGNTLWPEPLFSLVSGLVSMTNPPATSSSASSPAASSSASQSPPLSCAVQSNDSSPIYSAAPTFPTPNTDIFPEPQGQAFPGSAGTALQYPPPAYPAAKGGFQVPMIPDYLFPQQQGDLGLGTPDQKPFQGLESRTQQPSLTPLSTIKAFATQSGSQDLKALNTTYQSQLIKPSRMRKYPNRPSKTPPHERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQKDKKADKSVASAATSSLPSYPSPVATSYPSPVTTSYPSPATTSYPSPVPTSYSSPGSSTYPSPVHSGFPSPSVATTYSSVPPAFPAQVSSFPSSAVTNSFSASTGLSDMTTTFSPRTIEIC*