Sequence details bmy_12148 (Coding sequence)

Part of scaffold_707 (Scaffold)

For more information consult the page for scaffold_707 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FAM53C ENSTTRG00000005470 (Bottlenosed dolphin)

Gene Details

family with sequence similarity 53, member C

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005153, Bottlenosed dolphin)

Protein Percentage 99.18%
cDNA percentage 98.81%
Ka/Ks Ratio 0.11669 (Ka = 0.0039, Ks = 0.0332)

FAM53C ENSBTAG00000030529 (Cow)

Gene Details

Protein FAM53C

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013264, Cow)

Protein Percentage 96.71%
cDNA percentage 96.99%
Ka/Ks Ratio 0.24279 (Ka = 0.0162, Ks = 0.0669)

FAM53C  (Minke Whale)

Gene Details

family with sequence similarity 53, member C

External Links

Gene match (Identifier: BACU004105, Minke Whale)

Protein Percentage 99.07%
cDNA percentage 99.17%
Ka/Ks Ratio 0.25478 (Ka = 0.0045, Ks = 0.0177)

Additional orthologs identified in other species via the OPTIC pipeline.

FAM53C (Human)   Fam53c (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1098 bp    Location:618859..612219   Strand:-
Raw sequence 
>bmy_12148
ATGATAACCCTGATCACTGAGCAGCTACAGAAGCAGACTCTGGATGAGCTGAAATGCACTCGCTTCAGCATCAGTCTGCCTTTGCCTGATCATGTAGACATCTCCAACTGTGGGAATCCTTTCCAGCTTGTGTCTGGCTTGAGCCTGCACCTCAGACCACCCAGCCCAGGAAATTCCCCACAGGAGCAGCCCCTCTCCCAAGTCCTAAGCCCTGAGCCTCCAGACCCAGAAAAGCTTCCTGTGCCCCCTGCCCCTCCATCTAAGAGGCACTGCCGCTCACTCTCAGTGCCCGTGGACCTGTCTCGCTGGCAGCCGGTGTGGCGGCCCGCCCCCTCCAAGCTGTGGACTCCCATCAAGCACCGGGGCAGTGGTGGAGGGGGTGGGCCGCAGGTGCCTCACCAGAGCCCCCCGAAGCGGGTCTCCAGCCTCAGGTTCCTCCAAGCTCCCAGTGCCTCTACTCAATGTGCCCCACCCCACAGACCCTACAGCCCCCCTTTCTTCAGCCTGGCCCTGGCCCAAGATTCTTCTCGTCCCTCTGCCACCTCCCCCCAAAGTGGCTCCTGGGAGAGTGATGCTGAGTCCCTGTCACCTTGCCCACCCCAGCGTCGCTTCTCCCTGTCACCCAGCCTGGGCCCACAGGCAAGCCGCTTCTTGCCCTCTACCCGGAGCTCCCCCGCATCCTCCCCAGAGCTGCCCTGGCGACCTCGAGGCCTGCGCAATCTTCCCCGAAGCCGCTCACAGCCTTGTGATCTTGATGCCCGCAAAGCTGGGGTCAAGCGGCGCCACGAGGAGGACCCTCGGCGGCTGCGGCCTTCCTTGGACTTTGACAAGATGAATCAGAAACCATACTCAGGAGGTCTCTGTCTCCAAGAAACAGCCCGGGAAGGCAGCAGTATCTCTCCACCATGGTTCATGGCCTGTAGCCCCTCACACCTCTCTGCTTCCTGCAGCCCCATTGGGGATTCCTCCCAGGTGCTGAGTGAAAGCGAAGAGGAGGAGGAGGGGTCCGTGCGGTGGGGCCGGCAGGCGCTGAGCAAGCGAACATTGTGCCAGCAGGACTTTGGGGACCTGGACTTGAATCTGATTGAGGAGAACTAA

Related Sequences

bmy_12148T0 Protein

Length: 366 aa      View alignments
>bmy_12148T0
MITLITEQLQKQTLDELKCTRFSISLPLPDHVDISNCGNPFQLVSGLSLHLRPPSPGNSPQEQPLSQVLSPEPPDPEKLPVPPAPPSKRHCRSLSVPVDLSRWQPVWRPAPSKLWTPIKHRGSGGGGGPQVPHQSPPKRVSSLRFLQAPSASTQCAPPHRPYSPPFFSLALAQDSSRPSATSPQSGSWESDAESLSPCPPQRRFSLSPSLGPQASRFLPSTRSSPASSPELPWRPRGLRNLPRSRSQPCDLDARKAGVKRRHEEDPRRLRPSLDFDKMNQKPYSGGLCLQETAREGSSISPPWFMACSPSHLSASCSPIGDSSQVLSESEEEEEGSVRWGRQALSKRTLCQQDFGDLDLNLIEEN*