Sequence detailsbmy_12158 (Coding sequence)

Part of scaffold_713 (SequenceType object (1))

For more information consult the page for scaffold_713 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000006657 (Bottlenosed dolphin)

Gene Details

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000006303, Bottlenosed dolphin)

Protein Percentage 91.65%
cDNA percentage 93.04%
Ka/Ks Ratio 0.64466 (Ka = 0.0146, Ks = 0.0227)

SLCO1B3ENSBTAG00000022329 (Cow)

Gene Details

solute carrier organic anion transporter family, member 1B3

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000030202, Cow)

Protein Percentage 85.01%
cDNA percentage 90.83%
Ka/Ks Ratio 0.5112 (Ka = 0.0829, Ks = 0.1621)

SLCO1B3 (Minke Whale)

Gene Details

solute carrier organic anion transporter family, member 1B3

External Links

Gene match (Identifier: BACU016337, Minke Whale)

Protein Percentage 98.8%
cDNA percentage 99.2%
Ka/Ks Ratio 0.4123 (Ka = 0.0058, Ks = 0.0142)

Additional orthologs identified in other species via the OPTIC pipeline.

Slco1b2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1584 bp    Location:781581..819117   Strand:+
Raw sequence 
>bmy_12158
ATGGGAATTGGAAGTATTTTGACTGCTTTACCTCATTTCTTCATGGGATATTACAGGTATTCTAAAGACACCCCTATTAATCCATCAGAGAATTCAACATCAAGCTTATCAACTTGTTTGATTAATCAAAATTTGTCACTCAATAGAACATCACTGGAGATAGTGGGAAAAGGTTGGGAAAAGGAATCTGGGTCACATATGTGGATATATATTCTATTGGGTAATATGCTTCGTGGAATTGGGGAAACGCCCATAACACCCTTGGGGATTTCTTACATCGATGATTTTGCTAAAGAAGGACATTCTTCTTTTTATTTAGGTAATTTGTTTGCAGTAACAATGATTGGTCCAATCATTGGCTTTTTACTGGTATCTCTGTTTTCTAAAATGTATGTGGATATTGGATACGTAGATCTGAGCACTATCAGAATAACTCCTAAGGACTCTCGTTGGGTTGGTGCGTGGTGGCTTGGTTTCCTTGTGGCTGGACTAATGTCCATTATTTCTTCTATACCATTCTTTTTCTTGCCCAAAAATTTGGATAAACCAAAGAAAGAAAAAAAAGCTTCAGTATCTTTGCCTGTGCAAAATGAGGAAAAGAGTCAAATGGCTCATTTGACCAAGCAGGGGCAAAATGTTAGTGGAACTGTAGCTGGTTTTTTCCAGTCCTTGAAAAACATCCTTACCAATCCCCTGTATGTTATAACATTATTTTTGACACTGCTACAAGCCAGCAGCCATATTGGAATTATTACTTATGTCTTCAAATATGTAGAACAGCAGTATGGCCAGTCAGCATCTGAGACTAGCATTTTGTTTGGATTCATAACCATACCAACTTTTGCATCTGGAATGTTTACAGGAGGATATATCATTAAAAAATTCAAATTTACCTTGGTTGGAATTGCAAAATTTTCATTTTGTAGCCATATGTTGTCCTTCCTATTTCACCTATTAAATTTTGCGCTAATCTGTGAAAACAAATCAGTTGCTGGACTAACCTTGACCTATGATGGGTTTATGTTTCATAACTGTAGTTGTGTGGAAGTAAATGGTTTCCAGAGCAGAAATAACTCAATGAAGTTGGGTGAATGCCCCAAAAATGATCAATGTACAAGAAAATTTTACGTTTATATAGTAGTGCAAATATTTATCTATTTTTCTTCTGCATTGGGAAGCACCTCAAATATCATGCTGGTTTTTAAAAATGTTGAACCTGAACTGAAATCACTTGCCATGGGTTTCCATTCACTAACTATTCGAACACTAGGAGGAATTCCAGCTCCTATATATTTTGGGGCTCTGATTGATAGAGCTTGTATGAAGTGGTCTGTCAACAACTATTGGAAGCAAGGGTCTTGTCGGATATACAATTCCACATTATATGGAAATACTTTCTTTGGCTTGACTACAGGCTTAAAACTCCCAGCCCTTGTTTTATATGTTGTGTTAATTTCTGTTATGAAGAAAAAATATCAAGGAAAAGATATCAAGGCATCAGAAAATGAAAGAAAATCCGTGAATGAAGCGAACTTAGAACCGTTAAGTAGTGATGCCGGAGTGGACCGTGAAACACATATTTAA

Related Sequences

bmy_12158T0 SequenceType object (3)

Length: 528 aa      View alignments
>bmy_12158T0
MGIGSILTALPHFFMGYYRYSKDTPINPSENSTSSLSTCLINQNLSLNRTSLEIVGKGWEKESGSHMWIYILLGNMLRGIGETPITPLGISYIDDFAKEGHSSFYLGNLFAVTMIGPIIGFLLVSLFSKMYVDIGYVDLSTIRITPKDSRWVGAWWLGFLVAGLMSIISSIPFFFLPKNLDKPKKEKKASVSLPVQNEEKSQMAHLTKQGQNVSGTVAGFFQSLKNILTNPLYVITLFLTLLQASSHIGIITYVFKYVEQQYGQSASETSILFGFITIPTFASGMFTGGYIIKKFKFTLVGIAKFSFCSHMLSFLFHLLNFALICENKSVAGLTLTYDGFMFHNCSCVEVNGFQSRNNSMKLGECPKNDQCTRKFYVYIVVQIFIYFSSALGSTSNIMLVFKNVEPELKSLAMGFHSLTIRTLGGIPAPIYFGALIDRACMKWSVNNYWKQGSCRIYNSTLYGNTFFGLTTGLKLPALVLYVVLISVMKKKYQGKDIKASENERKSVNEANLEPLSSDAGVDRETHI*