Sequence detailsbmy_12161 (Coding sequence)

Part of scaffold_710 (SequenceType object (1))

For more information consult the page for scaffold_710 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

KATNB1 (Minke Whale)

Gene Details

katanin p80 (WD repeat containing) subunit B 1

External Links

Gene match (Identifier: BACU001826, Minke Whale)

Protein Percentage 99.52%
cDNA percentage 99.05%
Ka/Ks Ratio 0.05022 (Ka = 0.002, Ks = 0.0404)

Additional orthologs identified in other species via the OPTIC pipeline.

KATNB1 (Cow)   KATNB1 (Human)   Katnb1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 630 bp    Location:17430..530   Strand:-
Raw sequence 
>bmy_12161
ATGGCCACCCCCGTGGTCACCAAGACGGCCTGGAAGCTACAGGAGATCGTGGCCCATGCCAGCAACGTGTCCTCGCTGGTGCTGGGCAAAGCCTCGGGCCGGCTGCTGGCCACAGGCGGGGATGACTGCCATGTCAACCTGTGGTCCATCAACAAGCCCAACTGCATCATGAGCCTGACGGGTCACACGTCCCCAGTGGAGAGCGTACGTCTCAACACCCCTGAGGAGCTCATTGTGGCCGGTTCCCAGTCGGGCTCCATCCGCGTCTGGGACCTGGAAGCTGCCAAAATCCTTCGCACACTTATGGGACACAAAGCCAACATCTGCAGCCTGGATTTCCACCCGTATGGAGAGTTTGTGGCCTCGGGTTCCCAGGACACGAACATCAAGCTCTGGGACATCAGGAGGAAAGGCTGTGTCTTCCGATACAGGGGGCACAGCCAGGCCGTGCGGTGTCTCCGGTTCAGCCCTGACGGGAAGTGGTTGGCATCGGCCGCAGATGACCACACGGTGAAGCTCTGGGATCTGACTGCTGGCAAGATGATGTCCGAGTTCCCTGGCCACACGGGGCCTGTCAACGTGGTGGAGTTTCACCCCAATGAGTACCTCCTGGCTTCTGGTAGCTCTGAC

Related Sequences

bmy_12161T0 SequenceType object (3)

Length: 210 aa      
>bmy_12161T0
MATPVVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCHVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSD