Sequence detailsbmy_12167 (Coding sequence)

Part of scaffold_710 (SequenceType object (1))

For more information consult the page for scaffold_710 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCDC102AENSTTRG00000010062 (Bottlenosed dolphin)

Gene Details

coiled-coil domain containing 102A

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000009544, Bottlenosed dolphin)

Protein Percentage 87.8%
cDNA percentage 87.67%
Ka/Ks Ratio 0.08548 (Ka = 0.008, Ks = 0.0937)

CCDC102AENSBTAG00000000462 (Cow)

Gene Details

Coiled-coil domain-containing protein 102A

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000000588, Cow)

Protein Percentage 97.46%
cDNA percentage 93.47%
Ka/Ks Ratio 0.01785 (Ka = 0.0115, Ks = 0.6459)

CCDC102A (Minke Whale)

Gene Details

coiled-coil domain containing 102A

External Links

Gene match (Identifier: BACU001832, Minke Whale)

Protein Percentage 96.28%
cDNA percentage 95.92%
Ka/Ks Ratio 0.14979 (Ka = 0.0245, Ks = 0.1633)

Additional orthologs identified in other species via the OPTIC pipeline.

CCDC102A (Human)   Ccdc102a (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1659 bp    Location:180363..193730   Strand:+
Raw sequence 
>bmy_12167
ATGAGCCACGGGCCGAGCCCCCGGCTGGCCGAGTCCCCGCAGCTGTCCAAAGGTAGCCTCCTGACCATCTTGGGCAGCCCGTCGCCCGAGCGCATGGGGCCGGCCGACTCGCTGCCGCCCACGCCGCCGAGCGGCACGCCCTCGCCCGGGCCGCCTCCCGCTCTGCCGCTGCCGCCGGCGCCCGCGCTGCTGGCCGACGGGGACTGGGAGAGCCGTGAGGAGCTGCGGCTGCGGGAGTTGGAGGAGGCGCGCGCGCGGGCGGCGCAGATGGAGAAGACCATGCGCTGGTGGTCGGACTGCACGGCCAACTGGCGCGAGAAGTGGAGCAAGGTGCGCGCCGAGCGCAACCGCGCGCGCGAGGAGGTGCGCCAGCTGCGCCAGCGTCTCGACGCGCTCACCAAGGAGCTGGCGGGCGCGCGGCGCGAGCGCCAGGAGGCGCAGGGCGAGTGCGAGGCGCGGGGCCGCGAGCTGGCGCGGCTGCGGGGCGCCCGGGGGGTCACGGACAGGACGCCTGACGGTCCCGAGACCGAGCCAGAGAGGGAGCAGGAGCCAGTGCGCGACGTCGGGTCGGAGAGACCCCAGGGCAGCCAGGAGCTGGAGCTGGTGGAGGGCCTGCTGAAGAGCAGACCAGAGGAGCCCGAGGGCTGCTGGGAGGCACGCAGCATAGGGGCCGGGGCCTCACGGGGCAGCTCCGGCCGCCAGGAGCGTAGCCGACTGCCCTGGGAGGACACCGCCGCCATCGAGGAGGACGCCTCCAAGTTGACTGCCCTGCGGCTACGGCTGGATGAGTCCCAGAAGGTGCTGCTCAAGGAGCGAGAGGATAAAATGGCACTGAGCAGGAACATTGAGAAGCTGGAGGGGGAGCTCAGCCAGTGGAAGATCAAGTATGAGGAGCTGAGCAAGACCAAGCAGGAGATGCTCAAGCAACTCAGCATCCTGAAGGAGGCCCACCAGGACGAGCTGGGCCGCATGTCCGAAGACCTGGAGGATGAGCTGGGTGCACGCTCCAGCATGGACAGGAAGATGGCGGAGCTGAGGGGCGAGATGGAGCGGCTGCAGGCAGAGAACGCAGCCGAGTGGGGTCGCCGTGAGCGGCTGGAGACAGAGAAGCTGGGCCTAGAGCGTGAGAACAAGAAGCTGCGGGCACAGGTCGGGGACCTGGAGGAGGCGCTGGCCCGGCGACGGCGGCAGACAGCCAGCGCGCTGGACTGCGACCTGCGGGCCAGCCAAGCCGCGCTCTTCGAGAAGAACAAGGAGCTGGCAGACCTGAAGCATGTGCACAGCAAGCTGAAGAAGCAATTCCAGGAGAAGGTGGCGGAGCTGGCACACGCCAACCGGCGGGTGGAACAGCACGAGGCAGAGGTGAAGAAGCTGCGGCTGCGGGTGGAGGAGCTCAAGAAGGAGCTGGCCCAGGCTGAGGACGAGTTGGACGAGGCCCACAACCAGGCGCGTAAGCTGCAGCGGTCCCTGGACGAGCAGACGGAGCAAAGCGAGAACCTGCAAGTGCAGCTGGAGCACGTGCAGTCCAGGCTCCGCAGGCAGCAGCAGAACGCCCCCCTCTTTGGAAAGATCCGCAGTGCTCGCTTTGGCGCCGAGGAGGCAGGGGACGGAGCCAGCGACCTGGACGAGGATGAGGACCTGCAGATCCAGGTGGCCTAG

Related Sequences

bmy_12167T0 SequenceType object (3)

Length: 553 aa      View alignments
>bmy_12167T0
MSHGPSPRLAESPQLSKGSLLTILGSPSPERMGPADSLPPTPPSGTPSPGPPPALPLPPAPALLADGDWESREELRLRELEEARARAAQMEKTMRWWSDCTANWREKWSKVRAERNRAREEVRQLRQRLDALTKELAGARRERQEAQGECEARGRELARLRGARGVTDRTPDGPETEPEREQEPVRDVGSERPQGSQELELVEGLLKSRPEEPEGCWEARSIGAGASRGSSGRQERSRLPWEDTAAIEEDASKLTALRLRLDESQKVLLKEREDKMALSRNIEKLEGELSQWKIKYEELSKTKQEMLKQLSILKEAHQDELGRMSEDLEDELGARSSMDRKMAELRGEMERLQAENAAEWGRRERLETEKLGLERENKKLRAQVGDLEEALARRRRQTASALDCDLRASQAALFEKNKELADLKHVHSKLKKQFQEKVAELAHANRRVEQHEAEVKKLRLRVEELKKELAQAEDELDEAHNQARKLQRSLDEQTEQSENLQVQLEHVQSRLRRQQQNAPLFGKIRSARFGAEEAGDGASDLDEDEDLQIQVA*