Part of scaffold_710 (Scaffold)

For more information consult the page for scaffold_710 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CX3CL1 ENSTTRG00000010048 (Bottlenosed dolphin)

Gene Details

chemokine (C-X3-C motif) ligand 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009531, Bottlenosed dolphin)

Protein Percentage 79.38%
cDNA percentage 82.47%
Ka/Ks Ratio 0.63832 (Ka = 0.0423, Ks = 0.0663)

CX3CL1 ENSBTAG00000024869 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000034515, Cow)

Protein Percentage 64.5%
cDNA percentage 81.03%
Ka/Ks Ratio 0.72443 (Ka = 0.2129, Ks = 0.2939)

CX3CL1  (Minke Whale)

Gene Details

chemokine (C-X3-C motif) ligand 1

External Links

Gene match (Identifier: BACU001838, Minke Whale)

Protein Percentage 97.04%
cDNA percentage 97.9%
Ka/Ks Ratio 0.43503 (Ka = 0.0159, Ks = 0.0366)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1197 bp    Location:304032..294946   Strand:-
>bmy_12173
ATGGACCTTCCACCTCTCTCGTGGCTGCTCCGCCTGGCTGCCCTCTGCCATCTGATCGTGCTGCTGGCTGGACAGCACCTTGGTGTGAAGAAGTGTAACATCACGTGCAGCAAAATGACCTCGGAGATCCCCGTGGCTCGTCTAGTTCACTACCAACGAAATCAAGAATCATGCGGCAAACGTGCCATCATCCTGAAGACCATGAAGGAAAAATTATTCTGTGCTGACCCACAGGAGAAATGGGTCCAGAAAGCCATGGAGCATCTAGACCGCAAGGCTGCTGCTCTGGCTCCAAATGGCGGCACATTCGAGAAGCAAATCGGCGTGGGTGAGCCCAGGACCAGCCCAGCCACCAGGGGCATGGACTGGTCTGAGGCCTCAGAGACCAAATTCACAAGCGAAAGCAGTAGCCCGGAGGCACAGAGGGCCTTCGGGACTTCCCCAGAGCTGCCACCAGAAGTGGCTGATTCCAGGGGGACCAGGTCCCCCTCCACTTCAAAGACTCTGGATGGAGGGCCCGAGAGAACTGAGCTTTTCAACAAGGCTGCCGTCACCACCACCACGTCTTGGCAGAGTTCTACCGCCTACCAACCTGGGGCAGACCTCGAGGCTGAGGGGAAAGCCTCTGAGGCCCCCTCCACCCAGGCCCCCTCCACCCAGACCCCCTCCACCCAGGCCCCCTCCACCCAGGCCCCCACTATTTCACACACAGTCCCAGAGGACAACACTGGGCCCGAAGGCCAACCTGGGTGGATCAAGGGACAGCACCCCACGCCAGAGAACTCTCTAGGGTCCAAAGAAATGGGTCCCACTTCAGCTCACACGGATGCTTTCATGGGGCCCGGCAGCGTGTCCGATGTCTTCGTGGTCCCTGTATCCTCTGAAGCGGCCCCCAGCACGGATCCATTGGCCTCTGGCAGCTGGACCCCCAAGGTCAAGGAGCCCATTCACGCCACCATGGACCCCCAGAGGCTGGGTGTCCTCATCACTCCCATCCCCGACTCCCAGGCAGCCACCCGAAGGCAGGCAGTGGGGCTGTTGGCCTTCCTCGGTCTCCTCTTCTGCCTGGGGGTGGCCATGTTTGCCTATCAGAGCCTTCAGGGCTGCCCCCGCAAGATGGCAGGAGACATGGTGGAGGGGCTTCGCTACGTTCCCCGGAGCTGTGGCAGTAACTCGTACGTCCTGGTGCCAGTGTGA

Related Sequences

bmy_12173T0 Protein

Length: 399 aa      View alignments
>bmy_12173T0
MDLPPLSWLLRLAALCHLIVLLAGQHLGVKKCNITCSKMTSEIPVARLVHYQRNQESCGKRAIILKTMKEKLFCADPQEKWVQKAMEHLDRKAAALAPNGGTFEKQIGVGEPRTSPATRGMDWSEASETKFTSESSSPEAQRAFGTSPELPPEVADSRGTRSPSTSKTLDGGPERTELFNKAAVTTTTSWQSSTAYQPGADLEAEGKASEAPSTQAPSTQTPSTQAPSTQAPTISHTVPEDNTGPEGQPGWIKGQHPTPENSLGSKEMGPTSAHTDAFMGPGSVSDVFVVPVSSEAAPSTDPLASGSWTPKVKEPIHATMDPQRLGVLITPIPDSQAATRRQAVGLLAFLGLLFCLGVAMFAYQSLQGCPRKMAGDMVEGLRYVPRSCGSNSYVLVPV*