Part of scaffold_710 (Scaffold)

For more information consult the page for scaffold_710 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HERPUD1 ENSTTRG00000004336 (Bottlenosed dolphin)

Gene Details

homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004079, Bottlenosed dolphin)

Protein Percentage 83.46%
cDNA percentage 84.93%
Ka/Ks Ratio 0.52934 (Ka = 0.0571, Ks = 0.1079)

BT.105012 ENSBTAG00000016896 (Cow)

Gene Details

homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022472, Cow)

Protein Percentage 86.12%
cDNA percentage 87.57%
Ka/Ks Ratio 0.2834 (Ka = 0.0876, Ks = 0.3092)

HERPUD1  (Minke Whale)

Gene Details

homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1

External Links

Gene match (Identifier: BACU001844, Minke Whale)

Protein Percentage 79.22%
cDNA percentage 83.19%
Ka/Ks Ratio 0.72051 (Ka = 0.1789, Ks = 0.2483)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1380 bp    Location:710289..696321   Strand:-
>bmy_12183
CGGGGTGCCTATAAAAGGTGCCCGAGACGGGCGCGCGCGATCCAGAGAGGTGAACCGTTTTTGTGGGGGTTGGGGTGGCAGCGACACTTCCTGCCTGGCGTCTGGGAGCGCCGCCGAGCCCACAGCGCCGTCGACATGGAGCCCGAGCCCGTCACGCTCCTGGTGAAGAGCCCCAACCAGCGCCACCGCGACTTGGAGCTGAGCGGCGACCGCAGCTGGAGCGTGAGCCGCCTCAAGGCCCATCTTAGCCGCGTCTACCCCGAGCGCCCGAAAGCAATTTCCCTGGGAGTTAAGAAGTCAGCGTCCGGAGGACCAGAGGTTAATTTATTCTGGGAAGCTGTTGTTGGATCACCAGTGTCTCAGGGACTTGCTTCCAAAGCACTAATAAGGTTGAATTCAGGTCCTAAAGTACCTCCTTATTACTTTCAGCAGGAAAACCGGCATGTTTTGCATCTGGTGTGCAGTGTGAAGAGTCCTTCCAAAATGCCAGAAGCCAGCACAAAGGTTGCTGAATCCATAGAGCAGCCCGCTGGTCTTAATCAGGGACAGTCTCCTGGGGATTCCTCAAGTGACGGTTTAAGGCAAAGGGAGGTTGTTCGGAACCCTTCTCCCTCTGGATGGGAGAATATCTCGAGGCCTGAAGCTGTCCAGCCGGCGTTCCAAGGCCTGGGGCCTGGTTTCTCAGGCTACACAACCTATGGGTGGCTGCAGCTCTCCTGGTTCCAGCAGATATACGCACGGCAGTACTACATGCAGTACTTAGCAGCCACTGCTGCATCAAGGGCTTTTGTCCCCTCGCCAAGTGCACAAGAGATACCTGTGGTCTCTGCGCCTGCTCCAGCCCCTATCCGCAACCAGTTTCCAGCTGAAAACCAGCCCGCCAATCAGAATGCTGCTCCTCAAGTGGTGGTTAACCCTGGGGCCAATCAGAACTTGCGGATGAATGCACAGGGTGGCCCTATTGTGGAAGAAGATGATGAGATAAATCGAGATTGGTTGGATTGGACCTATTCAGCAGCTACGTTTTCCGTCTTTCTTAGTATCCTCTACTTCTACTCTTCCCTGAGCAGATTCCTCATGGTCATGGGGGCCACCGTTGTTATGTACCTGCATCATGTCGGGTGGTTTCCATTTCGACAGAGGCCAGTTCAGAACTTCCCGAATGATGGTCCTCCTCAGGAAGCTGCAAATCAGGACCCCAACAATAACTTCCAGGAAGACCCTGATCCTGAAATTGCAGACCCCAACCGCCTCCCTCCAGACAGAGACGTAGTGGATGACGAGCAGACCAGCCCTTCGTTTATGAGCACAGCCTGGCTCGTCTTCAAGACTTTCTTTGCCTCTCTCCTTCCGGAAGGCCCCCCAGCCATAGCAAACTGA

Related Sequences

bmy_12183T0 Protein

Length: 460 aa      View alignments
>bmy_12183T0
RGAYKRCPRRARAIQRGEPFLWGLGWQRHFLPGVWERRRAHSAVDMEPEPVTLLVKSPNQRHRDLELSGDRSWSVSRLKAHLSRVYPERPKAISLGVKKSASGGPEVNLFWEAVVGSPVSQGLASKALIRLNSGPKVPPYYFQQENRHVLHLVCSVKSPSKMPEASTKVAESIEQPAGLNQGQSPGDSSSDGLRQREVVRNPSPSGWENISRPEAVQPAFQGLGPGFSGYTTYGWLQLSWFQQIYARQYYMQYLAATAASRAFVPSPSAQEIPVVSAPAPAPIRNQFPAENQPANQNAAPQVVVNPGANQNLRMNAQGGPIVEEDDEINRDWLDWTYSAATFSVFLSILYFYSSLSRFLMVMGATVVMYLHHVGWFPFRQRPVQNFPNDGPPQEAANQDPNNNFQEDPDPEIADPNRLPPDRDVVDDEQTSPSFMSTAWLVFKTFFASLLPEGPPAIAN*