Part of scaffold_724 (Scaffold)

For more information consult the page for scaffold_724 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIM38 ENSTTRG00000016727 (Bottlenosed dolphin)

Gene Details

tripartite motif containing 38

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015860, Bottlenosed dolphin)

Protein Percentage 92.31%
cDNA percentage 94.59%
Ka/Ks Ratio 0.46085 (Ka = 0.0439, Ks = 0.0953)

TRIM38 ENSBTAG00000018523 (Cow)

Gene Details

Tripartite motif-containing protein 38

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000024658, Cow)

Protein Percentage 85.01%
cDNA percentage 89.43%
Ka/Ks Ratio 0.49569 (Ka = 0.0928, Ks = 0.1872)

TRIM38  (Minke Whale)

Gene Details

tripartite motif containing 38

External Links

Gene match (Identifier: BACU006897, Minke Whale)

Protein Percentage 93.16%
cDNA percentage 95.73%
Ka/Ks Ratio 0.71416 (Ka = 0.0403, Ks = 0.0564)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1056 bp    Location:399514..419351   Strand:+
>bmy_12197
ATGGCCTCAACCCCAATCACCAAGAAGATGAGGGAGGAAGCCACCTGTTCCATCTGTCTGCAACTGATGACTGAGCCAGTGAGCATCAACTGTGGCCACAGCTACTGCCACTGGTGCATCATGAGCTTCTGTGAGATGCAACCATGGCTGGGGTTGTTCTCCTGTCCCCAGTGTCGGGTGCCATTTAAAATGGCGAGCCTCCGACCCAACAAACAGCTGGGAAACCTCATTGAAGCCATCAAGGAGATGGACCAGGAAATGTTATGTGAGGAACATGGAGAGAAGCTCCATCTGTTCTGTGAAGACGAGGGCCAGCTCATCTGCTGGCGCTGTGATCGAGGACTGCAGCACAAAGGGCACACCACAGCTCTGGTGGAAGATGCATGCCAAGGTTACAAGGAAAAGCTCCAGGAAGCTGTGACAAAATTGAGGCAACTGGAAGAGGAATGTATGAACTTGAAGGTGTTCACGGCAAAGCAAATAACCGAATGGAATAGCTTCCTTCATGAGGAAGAGAAGTCTTACCTATGGAAACTGGAGAAAGAAAAAGAGCAGACTCTGAGGAGACTGAGGGACAATGAGGCCACTCTTGAACAGAAGAGCCATGAACTTGAGAGCTACATCCTGGAACTAGAGCATAAATGTCAGGGCTCAGCCCAAAATTTGCTGCAGGATGTGAAAGATACTTTGAGCAGGAGTTGGGCTGTGAAGCTAGAACAACCAGAGGCCCTCTCTTTGGACCTTCATACTGTGTGCAATGTTTCTGAGCTTTACTTTGATGTGAAGAAAGTGTTAAGGAGCTACCAAGTCAGCGTGACTCTGGATCCAGATACAGCTTATTACGAACTAATTCTGTCTGAGGATCGGAGACAAGTGACTCGTGGATGCCCCCAGGAGAATCTTGATACTTCTTCTAGGAGATTTAGTGCCTTACCCTGTATCCTGGGCTGTGAAAGCTTCACCTCAGGAAAACATTACTTTGAAGTGTTCTCTGAGGATGGGACTGGTTTTTTTCCTTTTTTCAATCTTGATGCCACTCCTGAGTTCCTGTTTTAG

Related Sequences

bmy_12197T0 Protein

Length: 352 aa      View alignments
>bmy_12197T0
MASTPITKKMREEATCSICLQLMTEPVSINCGHSYCHWCIMSFCEMQPWLGLFSCPQCRVPFKMASLRPNKQLGNLIEAIKEMDQEMLCEEHGEKLHLFCEDEGQLICWRCDRGLQHKGHTTALVEDACQGYKEKLQEAVTKLRQLEEECMNLKVFTAKQITEWNSFLHEEEKSYLWKLEKEKEQTLRRLRDNEATLEQKSHELESYILELEHKCQGSAQNLLQDVKDTLSRSWAVKLEQPEALSLDLHTVCNVSELYFDVKKVLRSYQVSVTLDPDTAYYELILSEDRRQVTRGCPQENLDTSSRRFSALPCILGCESFTSGKHYFEVFSEDGTGFFPFFNLDATPEFLF*