Sequence detailsbmy_12235 (Coding sequence)

Part of scaffold_718 (SequenceType object (1))

For more information consult the page for scaffold_718 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PIGGENSTTRG00000015728 (Bottlenosed dolphin)

Gene Details

phosphatidylinositol glycan anchor biosynthesis, class G

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000014905, Bottlenosed dolphin)

Protein Percentage 86.77%
cDNA percentage 88.58%
Ka/Ks Ratio 0.39982 (Ka = 0.033, Ks = 0.0825)

BT.105430ENSBTAG00000005964 (Cow)

Gene Details

GPI ethanolamine phosphate transferase 2

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000007828, Cow)

Protein Percentage 86.24%
cDNA percentage 89.7%
Ka/Ks Ratio 0.37878 (Ka = 0.0789, Ks = 0.2083)

PIGG (Minke Whale)

Gene Details

phosphatidylinositol glycan anchor biosynthesis, class G

External Links

Gene match (Identifier: BACU009112, Minke Whale)

Protein Percentage 91.42%
cDNA percentage 93.76%
Ka/Ks Ratio 0.64828 (Ka = 0.058, Ks = 0.0894)

Additional orthologs identified in other species via the OPTIC pipeline.

PIGG (Human)   Pigg (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3237 bp    Location:13047..54785   Strand:+
Raw sequence 
>bmy_12235
ACGCGGGGGCGCCGGGCACCTGTCTGGGTGTCCCGTTCGCGCTTGCTCGGAGGCGGCTCCCTGGAGGCGGAAGCTGCTGTCTTTGGGCGAGACGTGACTTGGAGTCCGGGAGTCCGGATCCCGGCCCGGCGGGTGGGCACGATGCGGCTGGGCTCCGGGACCTTCGCCTCCTGCTGCGTAGTGATCGAGGTGCTCGGGGTCGCGCTCTTCCTCCGGGGATTCTTCCCGGTTCCCGTTTGTTCCTTTTCCGGGACGGAGCGCCCAACAGAGTCCCCAGCGCCCGAACCCTCGGCTGGAGCCATTTCCAACTGGACCAAGCTCCCACCACCTCTCTTCAGTAAAGTTGTTATTATGCTGATAGACGCCTTGAGAGATGATTTTGTGTTTGGGTCAAAGGGTGTGAAATTTATGCCCTACACAACTTATCTTGTGGGAAAAGGATCATCTCACAGTTTTGTGGCTGAAGCAAAGCCACCTACAGTTACTATGCCTCGAATCAAGGCATTGATGACAGGGAGCCTCCCCGGCTTCATCGATGTCGTCAGGAACCTCAATTCTCCCACGCTGCTGGAAGACAACGTGATCACACGAGCAAAAGCAGCGGGGAAAAGAATCATCTTTTATGGAGATGAAACATGGGTGAAGTTATTCCCAAAGCATTTTCTGGAATATGATGGAACAACCTCTTTTTTTGTATCAGATTATACAGAGGTGGATGATAATGTTACAAGACATTTGGATAAAGTATTAAAAAGGCGGGATTGGGATGTGTTAATCCTCCACTACCTTGGGCTGGACCACATCGGCCACGTTTCTGGGCCCAACAGCCCGCTGATCGGGCGCAAGCTCAGTGAGATGGACAGCGTCCTGATGAAGATCCACACCTCACTGCTCTCAGAGGAGAGAGAGACTCTGTTACCCAATCTGCTGGTTCTTTGTGGTGATCATGGCATGTCTGAAGCTGGAGGTCACGGGGCCTCTTCTGTGGAGGAAGTAAACACCGCTCTGATCTTAATCAGCGCCGCATTTGAAAGGAAACCTGGTGACGTCAGGCATCCAAAGTATATTCAACAGACTGATTTGGCTGCAACACTATCAATAGGGCTTGGTCTGCCGATTCCAAGGAGCAGCATCGGCAGTCTTATATTCCCGGTTGTAGAAGGAAAACCAATGAGGGAACAACTGAGATTTTTACATTTAAATACAGTACAGCTTAGCAAGTTGTTGCAGGAGAATGTTCCGTCGTATAAAAAAGAGCCTGGATTTGAGCAGTTTAAAGTGTCAGAAAGGTTGCACGGGAACTGGATCAGACTGTACTTGGAGGAAAATAACTCAGAAGTCCTTTTCAACCTGGGAAGCAAGGTTCGCAGGCAGTACTTGGACGCGCTGAGGACCCTGAGCCTGTCCCTGAGCAGGCAAGCAGCCCAGTATGACGTCTACTCCATGGCGGCGGGGACCGTCCTGGTCCTGGAGGTTGTCGCCCTGCTCCTGCTCTGCGTCCCGCAAGCGCTGAGTGGCGAGGCTGAGCTGGACGTCCCTCTGCTGTCGCCCGTGTCCTCTCTGCTCTTCTACCTGCTGCTCCTGGCTCTCGCCGCGCTCCACGTCGTCGTGTGCACCTCCTCTGACAGCTCGTGCTATCTGTGCAGCCTCCCGTGGCTGACGGCAGGCGGAGTGATGGTGCTGATCTCCACGCTGCTCTGTGCAGTCGTATCTGCTCTCACCGGGATGTTTGCCGCTGGAAAGCGTCTGAGTAAGAATCCGCCTCCATCCAACTCAAGGTGGTCGGAGTTAGATCTTCTCATCTTGTCGGGGACCGTGGGCCACGTGTTGAGTCTGGGCGCAAGCAGCTTCATCGAAGAGGAGCACCAGACATGGTACTTCCTCGTCAACACGCTGTGTCTAGCTCTGTGCCACGAAATCTACAGAAACTGCTTTGTGGGAGACGACTGTGCGCCTCAGCATTGCCCGCACGCGGGAGAGGAGTTTGACAGGGTCGCAGCGGCCCCACAGGGCAAGAGCACTGGCCCTGACGTGTGGGAGCTCGACAGAGCGTCCAAGCACCCCTCTCCCCTGGAAGCGCTCAGAGGCCCTGAAAGGTGGATGGTGCTGGCGAGCCCATGGGTGATTCTGACCTGCTGCCGGCTGCTTCGGTCACTGAACCAGACGGGTGTGCAGTGGGCCCACCGGCCTGACCTGGGACACTGGCTCACCAGCTCTGATCATAAGGCTGAACTCTCTGTTCTGGCCACAGTTTCCCTCATCATGATTTTTGTGTTGGTTCAGAAGAGGTGCTCCCTGGCATCAAAAGTGGCCATGGCGTTTGGCCTGCTGGGCATCTATTGCTACAGGGTGGCCGTTGGAAATCTGCTGTTCCCATGGCAACAAAACAACAAAGACATTTCAAAGGGCATTACCGAAGCTCGTTTTGTTTATGTCTTTGTCCTTGGCATTCTGTTCACGGGCACCAAAGACTTGCTTAAATCTCAAGTCACTGCTGATGACGTCACAGTCAAGACCGTGGGCCTCTGGGAAATACACAGTGGATTAGTTCTCCTGGCGGCACTGCTCCTCAGGCCTCACAATCTTCCCGTCTTAGTGCTGAGCCTCGTCATCCAGACCATCATGACTCAGTTCGTCTGGAGGCCCCTGAGGCACGACGCAGCTGAGGTCACCGTGATGCATTACTGGTTCGGTCAAGCATTCTTCTATTTTCAGGCTCCCCAGGGCCCAGCTGAACAGTGGGCTTGTCTGATGAACGCAGGACACCCCTGCCCGGGGGCGCACAGCCCCACAGCTCTGCGTGGGAGCCCTCCCGGCAGCGCCCACACAGTCTACAAGCTGCAGGGAAACTCCAACAGCATCGCCACTGTGGACATCTCAGCAGGCTTTGTGGGCCTGGACGCCTACGTGGAGATCCCGGCCATGCTCCTGACGACGTTTGCGACATACACGGGGCCTGTGCTGTGGGCCAGCCACCTGGTAAACTTCCTGACCTCAGAAGCCAGCAGCGGTTCGGCACTGAGTCATGCTTGCTTCTGCTACGCACTGATTTGTTCTATTCCAGTTTCTGCGTATATCGTTTTGGTGACATCCCTGCGTTATCATTTATTTATATGGAGTGTGTTTTCTCCAAAACTTCTCTATGAGGGAATGCATCTACTCATCACAGCTGCTGTCTGTGTATTCTTCACAGCCATGGACCAAAGCAACACAAAGTCTTATAGACTAAGCTATTAA

Related Sequences

bmy_12235T0 SequenceType object (3)

Length: 1079 aa      View alignments
>bmy_12235T0
TRGRRAPVWVSRSRLLGGGSLEAEAAVFGRDVTWSPGVRIPARRVGTMRLGSGTFASCCVVIEVLGVALFLRGFFPVPVCSFSGTERPTESPAPEPSAGAISNWTKLPPPLFSKVVIMLIDALRDDFVFGSKGVKFMPYTTYLVGKGSSHSFVAEAKPPTVTMPRIKALMTGSLPGFIDVVRNLNSPTLLEDNVITRAKAAGKRIIFYGDETWVKLFPKHFLEYDGTTSFFVSDYTEVDDNVTRHLDKVLKRRDWDVLILHYLGLDHIGHVSGPNSPLIGRKLSEMDSVLMKIHTSLLSEERETLLPNLLVLCGDHGMSEAGGHGASSVEEVNTALILISAAFERKPGDVRHPKYIQQTDLAATLSIGLGLPIPRSSIGSLIFPVVEGKPMREQLRFLHLNTVQLSKLLQENVPSYKKEPGFEQFKVSERLHGNWIRLYLEENNSEVLFNLGSKVRRQYLDALRTLSLSLSRQAAQYDVYSMAAGTVLVLEVVALLLLCVPQALSGEAELDVPLLSPVSSLLFYLLLLALAALHVVVCTSSDSSCYLCSLPWLTAGGVMVLISTLLCAVVSALTGMFAAGKRLSKNPPPSNSRWSELDLLILSGTVGHVLSLGASSFIEEEHQTWYFLVNTLCLALCHEIYRNCFVGDDCAPQHCPHAGEEFDRVAAAPQGKSTGPDVWELDRASKHPSPLEALRGPERWMVLASPWVILTCCRLLRSLNQTGVQWAHRPDLGHWLTSSDHKAELSVLATVSLIMIFVLVQKRCSLASKVAMAFGLLGIYCYRVAVGNLLFPWQQNNKDISKGITEARFVYVFVLGILFTGTKDLLKSQVTADDVTVKTVGLWEIHSGLVLLAALLLRPHNLPVLVLSLVIQTIMTQFVWRPLRHDAAEVTVMHYWFGQAFFYFQAPQGPAEQWACLMNAGHPCPGAHSPTALRGSPPGSAHTVYKLQGNSNSIATVDISAGFVGLDAYVEIPAMLLTTFATYTGPVLWASHLVNFLTSEASSGSALSHACFCYALICSIPVSAYIVLVTSLRYHLFIWSVFSPKLLYEGMHLLITAAVCVFFTAMDQSNTKSYRLSY*