Part of scaffold_718 (Scaffold)

For more information consult the page for scaffold_718 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PDE6B ENSTTRG00000002928 (Bottlenosed dolphin)

Gene Details

phosphodiesterase 6B, cGMP-specific, rod, beta

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002758, Bottlenosed dolphin)

Protein Percentage 66.72%
cDNA percentage 67.1%
Ka/Ks Ratio 0.16338 (Ka = 0.0379, Ks = 0.2319)

PDE6B ENSBTAG00000017480 (Cow)

Gene Details

Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000052098, Cow)

Protein Percentage 85.94%
cDNA percentage 86.08%
Ka/Ks Ratio 0.15202 (Ka = 0.0933, Ks = 0.6139)

PDE6B  (Minke Whale)

Gene Details

phosphodiesterase 6B, cGMP-specific, rod, beta

External Links

Gene match (Identifier: BACU009113, Minke Whale)

Protein Percentage 97.36%
cDNA percentage 97.41%
Ka/Ks Ratio 0.20993 (Ka = 0.0173, Ks = 0.0824)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2553 bp    Location:92105..119579   Strand:+
>bmy_12236
ATGAGCCTCAGTGAGGAACAGGTGCAGGCGTTCCTGGACCAGAACCCCGGCTTCGCGGACCAGTACTTCGGGCGGAAGCTGAGCCCTGAGGCTGTGGCCAGCGCCTGCGAGGATGGGTGCCCGGCGGGCTGCACCCGTTTCCAAGAGCTGTGCCAGTGTCCCCACTTCAGCTCCTTTGCTGATGAGCTGACCGACTATGTGACAAGGAGCATCCTGGCCACGCCCATCATGAATGGCAAAGATGTTGTGGCTGTGATCATGGCTGTGAACAAGCTGGACGGCCCGTGTTTCACAAGTGAAGATGAAGACGTTTTCCTGAAGTATCTGAACTTCGGGACGTTAAACCTGAAGATCTACCACTTGAGCTACCTGCACAACTGCGAGACCCGCCGAGGCCAGGTACCCGCACGTGCTGCCAGCCAGGGTGTGGCCACGACCCACAGGTATGTCACTCCCCAGGTGCTGCTGTGGTCAGCCAACAAGGTGTTTGAGGAGCTGACGGACATCGAGAGGCAGTTCCACAAGGCCTTCTACACTGTGCGGGCCTATCTGAACTGTGACCGATACTCAGTGGGCCTCCTGGACATGACCAAGGAGAAGGAATTCTTTGACGTGTGGCCTGTGCTGATGGGGGAAGCCCAGCCGTACTCAGGCCCACGCACACCTGACGGCCGTGAAATCGTCTTCTACAAAGTCATCGACTACATCCTCCATGGCAAGGAAGACATCAAGGTCATCCCCTCACCCCCGGCCGATCACTGGGCCCTTGCCAGTGGCCTGCCAACCTACGTGGCGGAAAGTGGCTTTATCTGTAACATTATGAATGCCCCGGCTGATGAAATGTTCAAATTTCAGGAAGGGCCTCTGGACGACTCTGGGTGGATCATCAAGAATGTCCTCTCCATGCCCATCGTCAACAAGAAGGAGGAGATTGTGGGGGTCGCGACGTTTTACAACCGGAAAGACGGGAAGCCCTTCGACGAGCAGGATGAAGTCCTGATGGAGGTAAGCACCTGTCACCGGAGGGCCCCGGAGGCGACACCTGTGTGGTGGGGACACCGTCTGCTCCGGGCCCTGACCCGGCACGAGACCCCAGGAAGAGCTGAGAGGTCCCGTTCCGGGGGCTGGAGGCCGGCCCACCGGGAGCTCCCTGTGCGCCGGAGGGCGCCCGTGGCGGGTGACGCGCGCCTGCAGTCTCTCACACAGTTCCTGGGCTGGTCGGTGCTGAACACCGACACCTACGACAAGATGAACAAGCTGGAGAACCGCAAGGACATCGCCCAGGACATGGTTCTGTACCACGTGAGATGTGACAAGGACGAAATCCAGTTGGTCCTGCCGACAAGAGAACGCCTCGGGAAGGAGCCTGCTGACTGTGAGGAGGACGAGCTGGGGAAGATCTTGAAGCAAGAGCTGCCGGGGCCCACCAAGTTTGATATCTATGAGTTCCACTTCTCTGATCTGGAGTGCACGGAGCTGGAGCTGGTCAAATGCGGCATCCAGATGTACTACGAGCTGGGAGTGGTTCGAAAGTTCCAGATCCCCCAGGAGGTCTTGGTGCGGTTCCTGTTCTCCGTGAGCAAGGGGTACCGGAGAATCACCTACCACAACTGGCGCCACGGCTTCAACGTGGCCCAGACGATGTTCACGCTTCTCATGACAGGCAAACTGAAGAGCTACTACACGGACCTGGAGGCCTTCGCCATGGTGACCGCCGGCCTGTGCCACGACATCGACCACCGGGGCACCAACAACCTGTACCAGATGAAATCCCAGGACCCTTTAGCCAAGCTCCACGGCTCCTCGATTTTGGAACGACACCACCTGGAGTTTGGGAAGTTCCTGCTCTCCGAGGAGACCCTGAACATCTATCAGAACCTGAACCGGCGGCAGCATGAGCACGTGATCCACCTCATGGACATCGCCATCATCGCCACAGACCTGGCGCTCTACTTCAAGAAGAGGACGATGTTCCAGAAGATTGTGGATGAGTCCCAGAACTACGAGGACAGGAGCAGCTGGGTGGAGTACCTCTCCCTGGAGACGACGCGGAAGGAGATAGTCATGGCCATGATGATGACGGCGTGTGACCTGTCTGCCATCACCAAGCCCTGGGAAGTCCAGAGCAAGGTCGCTCTGCTGGTGGCAGCTGAGTTCTGGGAACAAGGGGACCTGGAGAGGACGGTTCTGGATCAGCAGCCCATTCCGATGATGGACCGGAACAAGGCGGCCGAGCTCCCCAAACTGCAGGTCGGCTTCATTGACTTTGTGTGCACGTTCGTGTACAAGGAGTTCTCCCGCTTCCACGAGGAGATCCTGCCCATGTTCGACCGGCTGCAGAACAACAGGAAGGAGTGGAAGACCCTGGCCGACGAGTACGAGGCGAAGGTGAAGGCCCTGGAGGAGGAGCAGAGGAAGGCGGCCGAGAGGACGGCGGCCAAAAAAGGTCTGCGCTCCACGCCTGCCGCCGCCAAGACCGCACAGCCGGGCCTCGGCCTGCAGGGGGCGGGCGCGAGGCAACAGAGTTCAACCTGGAGAAAAGCCAGGCTCTAG

Related Sequences

bmy_12236T0 Protein

Length: 851 aa      View alignments
>bmy_12236T0
MSLSEEQVQAFLDQNPGFADQYFGRKLSPEAVASACEDGCPAGCTRFQELCQCPHFSSFADELTDYVTRSILATPIMNGKDVVAVIMAVNKLDGPCFTSEDEDVFLKYLNFGTLNLKIYHLSYLHNCETRRGQVPARAASQGVATTHRYVTPQVLLWSANKVFEELTDIERQFHKAFYTVRAYLNCDRYSVGLLDMTKEKEFFDVWPVLMGEAQPYSGPRTPDGREIVFYKVIDYILHGKEDIKVIPSPPADHWALASGLPTYVAESGFICNIMNAPADEMFKFQEGPLDDSGWIIKNVLSMPIVNKKEEIVGVATFYNRKDGKPFDEQDEVLMEVSTCHRRAPEATPVWWGHRLLRALTRHETPGRAERSRSGGWRPAHRELPVRRRAPVAGDARLQSLTQFLGWSVLNTDTYDKMNKLENRKDIAQDMVLYHVRCDKDEIQLVLPTRERLGKEPADCEEDELGKILKQELPGPTKFDIYEFHFSDLECTELELVKCGIQMYYELGVVRKFQIPQEVLVRFLFSVSKGYRRITYHNWRHGFNVAQTMFTLLMTGKLKSYYTDLEAFAMVTAGLCHDIDHRGTNNLYQMKSQDPLAKLHGSSILERHHLEFGKFLLSEETLNIYQNLNRRQHEHVIHLMDIAIIATDLALYFKKRTMFQKIVDESQNYEDRSSWVEYLSLETTRKEIVMAMMMTACDLSAITKPWEVQSKVALLVAAEFWEQGDLERTVLDQQPIPMMDRNKAAELPKLQVGFIDFVCTFVYKEFSRFHEEILPMFDRLQNNRKEWKTLADEYEAKVKALEEEQRKAAERTAAKKGLRSTPAAAKTAQPGLGLQGAGARQQSSTWRKARL*