Sequence detailsbmy_12253 (Coding sequence)

Part of scaffold_718 (SequenceType object (1))

For more information consult the page for scaffold_718 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

UVSSAENSTTRG00000009596 (Bottlenosed dolphin)

Gene Details

UV-stimulated scaffold protein A

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000009105, Bottlenosed dolphin)

Protein Percentage 75.06%
cDNA percentage 76.52%
Ka/Ks Ratio 0.20379 (Ka = 0.0378, Ks = 0.1857)

UVSSAENSBTAG00000012577 (Cow)

Gene Details

UV-stimulated scaffold protein A

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000016697, Cow)

Protein Percentage 82.47%
cDNA percentage 85.83%
Ka/Ks Ratio 0.13464 (Ka = 0.0897, Ks = 0.6662)

Additional orthologs identified in other species via the OPTIC pipeline.

UVSSA (Human)   Uvssa (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2034 bp    Location:672363..698142   Strand:+
Raw sequence 
>bmy_12253
ATGGACCAGAAACTTTCAGAGTTGGTGGAAGAGCTCACGACTTCAGGAGAGCCCCAAGTGAACACCAAGAAAATGAAGGAGCTGAAGAAAATTTGCAAGTCTTCAGAGGAGCAGCTTGGTCACACCTACCACCTGCTGATGGCCCAGCTGAGCCAGGAGCACGCCGAGGTCCGCCTCTCCGCTTTCCAGGTCCTGGACCAGCTCTTCGCCAGGTCTCACCACTTCAGGATGCTAGTCGTTTCCAACTTCCAGGAGTTCCTGGAGCTCACACTGGGCACCGACCACGAGCGGCCCCTGCCACCCCCCAGGGAGGTGGCACAGAAGCTGAGGCGGGCCGCCACCCGGGCCATCCGTGGCTGGAACGAGAAGTATGGTACAGCCTATAAGAAGCTGGCCCTGGGCTTCCACTTCTTAACGCACAGCAAACAGGTAGATTTCCAAGATGTGGACGCTAGGACTCTGGCGGAGAGAAAGCGAGCAGAGGAGAAACAGAAGCGCTTGGACAGAATCTACAAGGAGAGGTCTGAGCAGGCCGTGCGGGAGATGGAAGAAATGTCGGGGGAGATCCAGAGCTGCCTCATGGAGCTGGAGAGCTGCTTCCGACTGCTGGTGCCCTTTGACCTTGACCCGACCCCGGGGGCTGCCTCGCCCGCCATGGCCGAGGAGGGTGGCAGGGACGAGGAGCAGCCCTGCTGCAGCAAGACCCTGGCCATCTGCGCCCGCCGCCCGGGAGCCGCGGGTGCGGAGGGGCCGCCCTCGGAGGACAAGGACGAGGACAGCGACCCGGAAGGGTTTGTGCGGCACCACGGGCTGGGCTCCCGCGAGTACACGCTCGAGGTGGAGCTCTCCTCAGACAGCCTGAAGGTGCACGAGGATGAGGACAACCTGGTCGTCATTCACGTGGCCCAGGACACGCTCAGGCTCATCCAGAACAGGTTCCTGCCAGCCGTGTGCTCCTGGGTCCAGCTGTTCACCCGCGCAGGGACGCATGGCGGGCACTTGGAGGGTGCCATCGACCTGAAGGCCGAGCTGGAAACTGCCCTGAGGCGATCTCGGGAGCTGGATGTCATGCCCGAGGAGGGCTGCAGGAGAGAGGCGGCAGCCCCGGGGGACAGGGATGAGGACGAGGACGACGAGGACTTTGTGGAGGTCCCGGAGAAGGAGGGCTATGAGGCCTGCATCCCTGAGCGCCTGCAGCCTGAGTGTGAGCTGAAGAAAGACCCAGCCACACTGGCCTCGCAGGCGAGGAAGAGAACGGGGAGCAGCGAGGAGGCCTGTGACCCCACCTCTGCGGCCGCCCAGCTGCATTGGCTCCAGCGCCACTTGCCCCCGGCCTTGCCCCCGAGCCCCAGGGTGCCGCTGGGTCCAGAGGAGGCCGAGAAGCTGGCGGCAGAGCGGGCCCGGGCGCCTGTCGTGCCCTTCGGGGTGGACTTGTGCTACTGGGGCCGAGAGGAGCCGATGGCCGGGAAGATCCTCAAGTCCGACTCTGAGCACCGCTTTTGGAAGCCCCGCGAGGTGGACGCGGAAGTAGAGAGCGCCACTGTCTCTGAGTCTCTCCGGAGCCGCCAAATCACCTTTGCGGGGCGATTCGAGCCCGTGCAGCACCGGTGCCGTGCCCCCCGGCCCGACGGCCGGCTCTGCGAGCGCCAAGACCGCCTGAAGTGCCCTTTCCATGGGAAGATCATCCCAAGAGATGACACGGGACGGCCCCTCCATCCGGAGGACAGGGCCCGCGAACAGAAGCAGCGGCTGCAGAGGCCGGCGGGGTGCCGAGCCTGGCAGGACCCTGAGCTCATGAGGGACGTGGAGGCAGCCACTGGGGTGGATCTCGGCTCGTCCAGGCCCGGTGGGAAGGGCAGGCGGCGGCGGTCCGGCCTCACCGACCTCAAGCGGCAGGCGGACACAGCGCGTGCACGCATCGCCAAGAAGGTCTTCGCCAAGGCCGCTGTGCAGAGGGTGGTCACAGCCATGAACCAGATGGACCGGAAGAAGCATGAGAAGTTTGCAAACCAGTTTAACTACGCGCTGCATTAG

Related Sequences

bmy_12253T0 SequenceType object (3)

Length: 678 aa      View alignments
>bmy_12253T0
MDQKLSELVEELTTSGEPQVNTKKMKELKKICKSSEEQLGHTYHLLMAQLSQEHAEVRLSAFQVLDQLFARSHHFRMLVVSNFQEFLELTLGTDHERPLPPPREVAQKLRRAATRAIRGWNEKYGTAYKKLALGFHFLTHSKQVDFQDVDARTLAERKRAEEKQKRLDRIYKERSEQAVREMEEMSGEIQSCLMELESCFRLLVPFDLDPTPGAASPAMAEEGGRDEEQPCCSKTLAICARRPGAAGAEGPPSEDKDEDSDPEGFVRHHGLGSREYTLEVELSSDSLKVHEDEDNLVVIHVAQDTLRLIQNRFLPAVCSWVQLFTRAGTHGGHLEGAIDLKAELETALRRSRELDVMPEEGCRREAAAPGDRDEDEDDEDFVEVPEKEGYEACIPERLQPECELKKDPATLASQARKRTGSSEEACDPTSAAAQLHWLQRHLPPALPPSPRVPLGPEEAEKLAAERARAPVVPFGVDLCYWGREEPMAGKILKSDSEHRFWKPREVDAEVESATVSESLRSRQITFAGRFEPVQHRCRAPRPDGRLCERQDRLKCPFHGKIIPRDDTGRPLHPEDRAREQKQRLQRPAGCRAWQDPELMRDVEAATGVDLGSSRPGGKGRRRRSGLTDLKRQADTARARIAKKVFAKAAVQRVVTAMNQMDRKKHEKFANQFNYALH*