Part of scaffold_719 (Scaffold)

For more information consult the page for scaffold_719 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HPN ENSTTRG00000011497 (Bottlenosed dolphin)

Gene Details

hepsin

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010903, Bottlenosed dolphin)

Protein Percentage 88.51%
cDNA percentage 88.51%
Ka/Ks Ratio 0.17177 (Ka = 0.0114, Ks = 0.0663)

HPN ENSBTAG00000003829 (Cow)

Gene Details

serine protease hepsin

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004986, Cow)

Protein Percentage 97.32%
cDNA percentage 94.13%
Ka/Ks Ratio 0.06218 (Ka = 0.0155, Ks = 0.2488)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 843 bp    Location:284540..295492   Strand:+
>bmy_12267
ATGGTGTCTATTGCAGGTGGCCGGACTGTGCCATGCTGCTCTGGACCCAAGGTGGCAGCTCTCACTGTGGGGACCGTGCTGCTCCTGACAGGCATCGGGGCAGCGTCCTGGGCCATTGTGACCGTTCTACTCAGGAGTGATCAGGAGCCGCTGCGGAACCGGGTCCTGTCCCGATGGCGAGTGTTTGCCGGTGCCGTGGCCCAGACCTCACCCCATGGCGTGCAGCTGGGGGTGCAGGCAGTAATCTACCACGGGGGCTATCTCCCCTTTCGAGACCCCAACAGCGAGGAGAACAGTAATGACATTGCCCTGGTCCACCTCTCCAGCTCCCTGCCCCTCACAGGTCTGTACCAGGCGGGGCAGGCCGGCAGGGGTGGGACCAGCGTGGTCTGTCTCACAGAGTACATCCAGCCCGTGTGCCTCCCGGCTGCTGGGCAGGCCCTAGTGGACGGCAAGATCTGCACCGTGACTGGCTGGGGCAACACACAGTACTACGGCCAACAGGCGGGGGTACTCCAGGAGGCCCGAGTCCCCATAATCAGCAGTGATGTCTGCAACGGCCCCGACTTCTACGGGAACCAGATCAAACCCAAGATGTTCTGTGCCGGCTATCCTGAGGGTGGCATTGATGCCTGCCAGGGCGACAGCGGTGGCCCCTTCGTGTGTGAGGACAGCATCTCTCGAACGCCACGTTGGCGGCTGTGTGGCATCGTGAGCTGGGGCACCGGCTGTGCCCTGGCGCAGAAGCCAGGCGTCTACACCAAAGTCAGTGACTTCCGGGAGTGGATCTTCCAGGCCATAAAGACTCACTCCGAAGCCAGCGGCATGGTGACCCAGCTCTGA

Related Sequences

bmy_12267T0 Protein

Length: 281 aa      View alignments
>bmy_12267T0
MVSIAGGRTVPCCSGPKVAALTVGTVLLLTGIGAASWAIVTVLLRSDQEPLRNRVLSRWRVFAGAVAQTSPHGVQLGVQAVIYHGGYLPFRDPNSEENSNDIALVHLSSSLPLTGLYQAGQAGRGGTSVVCLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISSDVCNGPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL*