Part of scaffold_719 (Scaffold)

For more information consult the page for scaffold_719 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LGI4 ENSTTRG00000002322 (Bottlenosed dolphin)

Gene Details

leucine-rich repeat LGI family, member 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002175, Bottlenosed dolphin)

Protein Percentage 86.34%
cDNA percentage 86.11%
Ka/Ks Ratio 0.10108 (Ka = 0.0034, Ks = 0.0333)

LGI4 ENSBTAG00000017814 (Cow)

Gene Details

leucine-rich repeat LGI family member 4 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025189, Cow)

Protein Percentage 95.53%
cDNA percentage 93.36%
Ka/Ks Ratio 0.06515 (Ka = 0.0208, Ks = 0.3195)

LGI4  (Minke Whale)

Gene Details

leucine-rich repeat LGI family, member 4

External Links

Gene match (Identifier: BACU000587, Minke Whale)

Protein Percentage 99.77%
cDNA percentage 99.62%
Ka/Ks Ratio 0.05669 (Ka = 0.001, Ks = 0.0168)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1614 bp    Location:346530..338724   Strand:-
>bmy_12269
ATGGGAGGGGCAGGAATCCTGCTGCTGCTGCTGGCTGGGGTGGGCGTGGGGGAGGCCTGGAGACCCCCAAAGGGAAAGTGTCCTCTGGGTTGCTCCTGCTCCAAAGACAGTGCCCTGTGTGAGGGCTCCCCGGACCTGCCCGAGAGCTTCGCCCCGACCCTGCTGTCGCTCTCACTCGTTAGGACTGGAATCACCCAGCTGAAGGCCGGCAGCTTCCTGAGGGTACCGTCACTGCACCTGCTCCTCTTCACGTCCAACTCCTTCTCCGTGATCGAGGACGATGCGTTTGCGGGCCTGTCCCACCTGCAGTACCTCTTTATCGAAGACAATGAGATTGGCTCCATCTCTAAGAACGCTCTCAGAGGACTCCGCTCACTCACACACCTAAGCCTGGCCAATAACCATCTCGAGACCCTCCCCAGATTCCTGTTCCGAGGCCTGGAGACCCTGACTCACGTGGACCTCCGCGGGAACCCGTTCCAGTGTGACTGCCGTGTCCTCTGGCTGCTGCAGTGGATACCCACCGTGAACGCCAGCGTGGGGACTGGGGCCTGTGCCGGCCCCACCGCCCTGGCCCACATGCAGCTCCACCACCTCGACCCCAAGACGTTCAAGTGCAGAGCCATAGAGCTGTCCTGGTTCCAGACGGTCGGCGAGTCGGCGCTGGGCGTAGAGGCGTTCTCCTACCAAGGGGAGCCCCACGTCGTCCTGGCACAGCCCTTTGCCGGCCGCTGCCTGATCCTGACCTGGGACTACAGCCTGCAGCGCTTCCGGCAGGAGGAAGAGCTGTCTGCGCCCTCGGTGGTGTCCTGCAAGCCGCTGGTGCTGGGCCCGCGCCTCTTTGTGCTGGCCGCCCGCCTGTGGGGAGGCTCGCAGCTGTGGGCCCGGCCCGGCCCCGACCTGCGCCTGGCCCCGCTGCAGGCCCTGGCTCCACGGCGGCTGCTGCGGCCCAATGATGCCGAGCTCCTGTGGCTGGACGGGCAGCCCTGCTTCGTGGTGGCCGACGCCTCCAAGGCGGGCAGCACCACGCTGCTGTGCCGGGACGGGCCCGGCTTCTACCCGCGCCAGAGCCTGCACGCCTGGCACCGGGACACGGATGCCGAGGCCCTCGAGCTGGACGGCCGGCCCCATCTGCTGCTAGCCTCCGCCTCGCAGCGGCCCGTGCTCTTCCACTGGTTTGGGGGCCGCTTCGAGAGGCGCACGGACATCCCCGAGGCCGAGGACGTCTATGCCACACGCCACTTCCAGGCCAGCGGAGATGTGTTCCTGTGCCTGACACGCTACATCGGGGACTCCATGGTCATGCGCTGGGATGGTTCCATGTTTCGCCCGCTGCAGCAGCTTCCCTCTCGCGGTGCCCACGTCTTCCAGCCACTGCTCATCGCCAGGGACCAGCTGGCTATCCTGGGCAGCGACTTCGCCTTCAGCCAGGTCTTCCGCCTTGAGCCTGACAGGGGGCTCCTGGAGCCACTGCAGGAGCTGGGGCCCCCAGCCTTGGTGGCCCCCCGTGCCTTTGCCCATATCACCATGGCCGGCAGACGCTTCCTCTTCGCTGCTTGCTTCAAGGGCCCCACACAGATCTACCAGCATCACGAGTTAGACCTCAGTGCCTGA

Related Sequences

bmy_12269T0 Protein

Length: 538 aa      View alignments
>bmy_12269T0
MGGAGILLLLLAGVGVGEAWRPPKGKCPLGCSCSKDSALCEGSPDLPESFAPTLLSLSLVRTGITQLKAGSFLRVPSLHLLLFTSNSFSVIEDDAFAGLSHLQYLFIEDNEIGSISKNALRGLRSLTHLSLANNHLETLPRFLFRGLETLTHVDLRGNPFQCDCRVLWLLQWIPTVNASVGTGACAGPTALAHMQLHHLDPKTFKCRAIELSWFQTVGESALGVEAFSYQGEPHVVLAQPFAGRCLILTWDYSLQRFRQEEELSAPSVVSCKPLVLGPRLFVLAARLWGGSQLWARPGPDLRLAPLQALAPRRLLRPNDAELLWLDGQPCFVVADASKAGSTTLLCRDGPGFYPRQSLHAWHRDTDAEALELDGRPHLLLASASQRPVLFHWFGGRFERRTDIPEAEDVYATRHFQASGDVFLCLTRYIGDSMVMRWDGSMFRPLQQLPSRGAHVFQPLLIARDQLAILGSDFAFSQVFRLEPDRGLLEPLQELGPPALVAPRAFAHITMAGRRFLFAACFKGPTQIYQHHELDLSA*