Sequence detailsbmy_12273 (Coding sequence)

Part of scaffold_719 (SequenceType object (1))

For more information consult the page for scaffold_719 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LSRENSTTRG00000009313 (Bottlenosed dolphin)

Gene Details

lipolysis stimulated lipoprotein receptor

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008830, Bottlenosed dolphin)

Protein Percentage 97.85%
cDNA percentage 98.03%
Ka/Ks Ratio 0.18539 (Ka = 0.0102, Ks = 0.0553)

LSRENSBTAG00000017033 (Cow)

Gene Details

lipolysis-stimulated lipoprotein receptor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000022648, Cow)

Protein Percentage 93.68%
cDNA percentage 91.49%
Ka/Ks Ratio 0.09166 (Ka = 0.0305, Ks = 0.3323)

LSR (Minke Whale)

Gene Details

lipolysis stimulated lipoprotein receptor

External Links

Gene match (Identifier: BACU000591, Minke Whale)

Protein Percentage 89.98%
cDNA percentage 91.94%
Ka/Ks Ratio 0.48051 (Ka = 0.0716, Ks = 0.149)

Additional orthologs identified in other species via the OPTIC pipeline.

LSR (Human)   Lsr (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1971 bp    Location:430746..445495   Strand:+
Raw sequence 
>bmy_12273
ATGTTTCCTCTAGTTAAAATCCTAGAACAGGGTGGGCTTGGAATAGGAACAAGGAACGGAAGCAGGAAGGGGAGGAGCAGGCACCCCTCCCAGCCTTGGTGCGCGCCGCGCCCCCTACCCTCCCGGTACCTGGGAGGGGACGCGCGGGCCCGACGCGCCCAGACCGCCGAGATGGCGCCTGTGGCCCGCCGGCTTTTCTGGGGGCGGCTGGGCTCCTGCCCGGCCACCCCGGGCTGGGGCACGGTCGTCTTCGTGTGGCTCTTTCTCAGCACCTTGTGCACAGCCCCTGCCGGCGCCATCCAGGTGACTGTGTCACAACCCTACCATGTGGTGATCCTATTCCAACCCGTGACCCTGCCCTGCACCTACCAGTCGACCACGACCCCCACGGCGCCCATCGTGATCTGGAAGTACAAGTCTTTCTGCCGGGACCGCATCGCTGATGCCTTCTCCCCAGCCAGTGTTGACAACCAGCTCAACGCCCAGCTGGCGGCTGGTAACCCGGGCTACAACCCCTATGTGGAGTGCCAGGACAGCGTGCGCACCGTCAGGGTTGTGGCCACCAAACAGGGCAATGCCGTGACCCTGGGAGACTACTACCAGGGCCGGAGGATCACCATCACAGGAAATGCTGACCTGACCTTTGACCAGACGGCTTGGGGGGACAGCGGTGTGTACTACTGCTCTGTGGTCTCAGCCCAGGACCTCCAGGGGAACAACGAGGCCTACGCAGAGCTCATCGTCCTCGGCAGGACCTCTGGGGTGGCTGAGCTCTTACCCGGTTTTCAGGCGGGGCCCATGGAAGACTGGCTGTTCGTGGTCGTGGTCTGCCTGGCTGCCTTCCTCGTCTTCCTCCTGCTGGGCATCTGCTGGTGTCAGTGCTGCCCCCACACTTGCTGCTGTTACGTCAGGTGCCCCTGCTGCCCCGAAAAGTGCTGCTGCCCAGAGGCCCTGTATGCTGCAGGCAAAGCTGCCACCTCAGGCGTCCCAAGCATCTACGCCCCCAGCACCTATGCCCACCTCTCCCCTGCCAAGACCCCGCCGCCCCCAGCCATGATTCCCATGGGCCCTCTGTACAACGGGTACTCTGGAGACTTCGACAGGAATAGCTCAGTTGGTGGCCACAGCTCCCAGGTACCCCTGCTTCGTGACACAGACAGCAACGTGACCTCTGAAATCCGTAGTGGCTATAGGATTCAGGCCAACCAGCAGGACGACTCCATGCGGGTCCTGTACTACATGGAGAAGGAGCTGGCCAACTTTGACTCTTCTCGACCTGGTCCCCCAAATGGCCGTGTAGAGCGAGCCATGAGTGAAGTCACCTCCCTCCATGAGGACGACTGGAGATCCCGGCCTTCCCGGGGCCCTGCCCTCACCCCAATCCGGGATGAGGAATGGGGTCACCACTCCCCGCGGAGTTCGAGGAGGTGGGAACAAGAGCCCCCCCTGGACCGGCCAGGGAGTGGCTGGGGGGCCGGGTGGCCCCGAGCCCGTTCTGTGGATGCTCTAGATGACCTCGCCCGGCCCGGCTCCGCTGAATCAGGGAGGTCTCCCCCAAGTAGTGGGAGGAGAGGCCGGGCCTGTGCACCCCCCCGAAGCCGCAGCCGTGATGACCTCTACGACCAAGACCAAGACGACTCAAGGCACTTCCCACACTCCCGGGATCCCTACTATGATGACTTCAGGTCTAGAGGCCGCCCTCATGCGGACCCTAGGGCCCGCTACCACCCCTCCCGGGACCCTCCAGATGATGGCTCCAGGTCTGGGGACCCCCAATATGATGGGGAGCTACTAGAAGAGGCCTTGAGGAAAAAGCGGCCAGCGGAGAGAAGGAGACCTTACAGGGAGGAAGAAGAGGAAGCCTACCACCCTCCGGCGCCTCCCCCTTACTCTGAGACTGACTCCCAGGCCTCACGGGAGCGGAGGCTTAAGAAGAACTTGGGCCTGAGTCGGGAAAGTTTAGTCGTCTGA

Related Sequences

bmy_12273T0 SequenceType object (3)

Length: 657 aa      View alignments
>bmy_12273T0
MFPLVKILEQGGLGIGTRNGSRKGRSRHPSQPWCAPRPLPSRYLGGDARARRAQTAEMAPVARRLFWGRLGSCPATPGWGTVVFVWLFLSTLCTAPAGAIQVTVSQPYHVVILFQPVTLPCTYQSTTTPTAPIVIWKYKSFCRDRIADAFSPASVDNQLNAQLAAGNPGYNPYVECQDSVRTVRVVATKQGNAVTLGDYYQGRRITITGNADLTFDQTAWGDSGVYYCSVVSAQDLQGNNEAYAELIVLGRTSGVAELLPGFQAGPMEDWLFVVVVCLAAFLVFLLLGICWCQCCPHTCCCYVRCPCCPEKCCCPEALYAAGKAATSGVPSIYAPSTYAHLSPAKTPPPPAMIPMGPLYNGYSGDFDRNSSVGGHSSQVPLLRDTDSNVTSEIRSGYRIQANQQDDSMRVLYYMEKELANFDSSRPGPPNGRVERAMSEVTSLHEDDWRSRPSRGPALTPIRDEEWGHHSPRSSRRWEQEPPLDRPGSGWGAGWPRARSVDALDDLARPGSAESGRSPPSSGRRGRACAPPRSRSRDDLYDQDQDDSRHFPHSRDPYYDDFRSRGRPHADPRARYHPSRDPPDDGSRSGDPQYDGELLEEALRKKRPAERRRPYREEEEEAYHPPAPPPYSETDSQASRERRLKKNLGLSRESLVV*