Sequence details bmy_12275 (Coding sequence)

Part of scaffold_719 (Scaffold)

For more information consult the page for scaffold_719 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HAMP ENSTTRG00000009312 (Bottlenosed dolphin)

Gene Details

hepcidin antimicrobial peptide

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008828, Bottlenosed dolphin)

Protein Percentage 85.19%
cDNA percentage 90.12%
Ka/Ks Ratio 0.42139 (Ka = 0.0833, Ks = 0.1977)

Additional orthologs identified in other species via the OPTIC pipeline.

HAMP (Cow)   HAMP (Human)  

Genome Location

Sequence Coding sequence

Length: 249 bp    Location:458015..459622   Strand:+
Raw sequence 
>bmy_12275
ATGGCACTGAACACGCAGATCCGGGCCACCTGCCTCCTGCTTCTCCTCCTGGTCAGCCTGACCAGTGCCTTCGTTCTCCCACCTGAGACAAGACAGCTCGCAGACCTCCAGACCCAGGACACAGCTGGAGACGCAGCTGGCTTGACGCCCGTGCTCCAGAGGCTGAGACGAGACACCCACTTCCCCATGTGCATATTCTGCTGCGGCTGCTGTGGTAAAGGAGGGTGTGGGTTATGCTGCAAAACGTAG

Related Sequences

bmy_12275T0 Protein

Length: 83 aa      
>bmy_12275T0
MALNTQIRATCLLLLLLVSLTSAFVLPPETRQLADLQTQDTAGDAAGLTPVLQRLRRDTHFPMCIFCCGCCGKGGCGLCCKT*