Sequence detailsbmy_12333 (Coding sequence)

Part of scaffold_722 (SequenceType object (1))

For more information consult the page for scaffold_722 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VTA1ENSTTRG00000014998 (Bottlenosed dolphin)

Gene Details

Vps20-associated 1 homolog (S. cerevisiae)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000014219, Bottlenosed dolphin)

Protein Percentage 33.04%
cDNA percentage 52.23%
Ka/Ks Ratio 0.79579 (Ka = 0.8155, Ks = 1.0248)

BT.21128ENSBTAG00000005851 (Cow)

Gene Details

vacuolar protein sorting-associated protein VTA1 homolog

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000007693, Cow)

Protein Percentage 32.89%
cDNA percentage 49.78%
Ka/Ks Ratio 0.67882 (Ka = 0.8811, Ks = 1.298)

Genome Location

Sequence SequenceType object (2)

Length: 681 bp    Location:107797..108515   Strand:+
Raw sequence 
>bmy_12333
ATGGATCAGTTCAAAGCTCTTAAGAAACGGCTGGGTGGTAATAAAATTGTTACTCAAGAAATAGCTGGTTCTGTCCATTTGGAGAATTATGCTCTGAAATGTTTTTGTGTGCAGACAATGAAGATAGCGCCAGTTGTTTTCACAAGATCAAGTCCGTCTATCCTGCAAATCCTTAAGAGCTGTCATGACAAAAATATACAAGGTGGGGTGACCTATATCCATACTTTTTTAAAGCATAGGGAGACGCCTCAAGGAAGACCTGTTAGAATTGGAAAGATACTGATGTTGAAGAAAATCAAGAAGGTGGAGCAGCCCTCTACCCACTTGACCCACTTGAATCAGAATCATCTTCATCTTCAACTGAGGACTCAGAGAGCACTCCCCCAGGCAGCTGTTCTGGAACGGAGCCCTCTCCGTGCACACGCCCTGGCGGATACGGCGGCAGCAGTGCCTCACAGCACGGGTGAATCGGGTACTGTCCTACCTAGGCCATGGGTTCTTCTGGCCATTTATCCACAGTTTCCACGGGGGGGGGGATGCTGTTCTAACACCAGAGGACGTGGCTCGAGCGCAGATGCACTGCAGGCGTGCTGGCTGGCGGTGCACTGCAATGTGAACGTTCAGCCCTGCTGTGCAGAACCTTCAGAGGCCCTCAAGTTACTGTCTGCAGGCAGAGGGTGA

Related Sequences

bmy_12333T0 SequenceType object (3)

Length: 227 aa      View alignments
>bmy_12333T0
MDQFKALKKRLGGNKIVTQEIAGSVHLENYALKCFCVQTMKIAPVVFTRSSPSILQILKSCHDKNIQGGVTYIHTFLKHRETPQGRPVRIGKILMLKKIKKVEQPSTHLTHLNQNHLHLQLRTQRALPQAAVLERSPLRAHALADTAAAVPHSTGESGTVLPRPWVLLAIYPQFPRGGGCCSNTRGRGSSADALQACWLAVHCNVNVQPCCAEPSEALKLLSAGRG*