Part of scaffold_723 (Scaffold)

For more information consult the page for scaffold_723 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HBS1L ENSTTRG00000003715 (Bottlenosed dolphin)

Gene Details

HBS1-like (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003489, Bottlenosed dolphin)

Protein Percentage 98.46%
cDNA percentage 98.65%
Ka/Ks Ratio 0.22375 (Ka = 0.0072, Ks = 0.0322)

BT.36640 ENSBTAG00000020174 (Cow)

Gene Details

HBS1-like protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026869, Cow)

Protein Percentage 96.93%
cDNA percentage 96.23%
Ka/Ks Ratio 0.11843 (Ka = 0.0142, Ks = 0.1197)

HBS1L  (Minke Whale)

Gene Details

HBS1-like (S. cerevisiae)

External Links

Gene match (Identifier: BACU014326, Minke Whale)

Protein Percentage 98.79%
cDNA percentage 99.19%
Ka/Ks Ratio 0.54452 (Ka = 0.0068, Ks = 0.0125)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1566 bp    Location:503928..536151   Strand:+
>bmy_12341
ATGACTGTATCTGGAAAGAAGCAAACTATGGGATTTGAAGTGCCTGGAGTAACTGCTGAAGAAAATGGTCATATTTTCCACACACCTCAAAAAGGACATTCTAGTGAAGATACCAGCCTTGTTTCTTCTGATGTACTTGAGACCGCTTCTAAATCAGCTCTTCCATCCCACACCATTCAAGCATCAGAAGAGCAGAGTTCAACACCAACACCAGTGAAAAAGTCTAGCAAGCTGAGGCAACAAATAGATATCAAAGCGGAGCTGGAAAAGCGGCAAGGAGGGAAGCAACTCCTCAACCTAGTGGTCATTGGTCATGTTGATGCTGGGAAAAGTACTCTGATGGGCCATTTGCTTTATCTTCTGGGTAATGTAAACAAAAGAACTATGCATAAGTATGAACAAGAGTCTAAAAAGGCTGGCAAAGCTTCGTTTGCATATGCATGGGTCTTGGATGAGACTGGCGAAGAAAGGGAAAGGGGAGTAACAATGGATGTTGGTATGACAAAGTTTGAGACCGAAACCAAAGTTATTATATTAATGGATGCTCCAGGCCATAAGGATTTCATTCCAAATATGATTACAGGAGCAGCCCAGGCAGATGTAGCTGTTTTGGTTGTAGATGCCAGCAGGGGAGAGTTTGAAGCTGGATTTGAGACTGGGGGACAAACACGAGAACATGGCCTCTTGGTTCGTTCTCTGGGAGTGACCCAGCTCGCAGTTGCAGTCAATAAAATGGATCAGGTTAATTGGCAACAAGAAAGGTTTCAAGAGATTACTGGAAAACTTGGGCACTTTCTTAAGCAAGCAGGTTTTAAGGAAAGTGATGTAGCTTTTATCCCTACAAGTGGTCTCAGTGGTGAAAATCTAATCGCAAGATCTCAGTCAAGTGAACTTACAAAATGGTATAAAGGACTATGTTTATTAGAACAAATTGATTCCTTCAAGCCTCCTCGAAGATCTGTTGACAAGCCTTTTAGATTATGTGTATCTGATGTTTTCAAAGATCAAGGATCTGGATTTTGTGTAACTGGTAAAATTGAAGCTGGTTATATCCAAACTGGTGACCGACTACTAGCAGTGCCTCCTAATGAAACTTGTACTGCAAAAGGAATCACTCTGCATGATGAACCTGTCGACTGGGCGGCAGCGGGCGATCATGTTAGTCTCACGTTGGTTGGGATAGATGTCATCAAAATCAATGTTGGCTGCATATTTTGTGGCCCCAAAGAACCCATTAAGGTTTGCACTCGTTTCAGAGCCCGAATCCTCATCTTTAATATTGAAATTCCTATCACTAAAGGATTTCCTGTGCTGTTACACTACCAAACCGTCAGTGAACCTGCCGTTGTTAAACGATTGATTAGCGTCTTAAACAAAAGCACTGGTGAAGTCACAAAGAAAAAGCCTAAATTGTTGACCAAAGGCCAGAATGCATTGGTGGAGCTACAGACACAAAGACCAGTGGCCCTTGAGCTGTACAAAGACTTTAAAGAGCTGGGGAGATTCATGCTGCGCTACAGTGGTTCTACCATAGCTGCTGGTGTAGTCACTGAGATAAAAGACTGA

Related Sequences

bmy_12341T0 Protein

Length: 522 aa      View alignments
>bmy_12341T0
MTVSGKKQTMGFEVPGVTAEENGHIFHTPQKGHSSEDTSLVSSDVLETASKSALPSHTIQASEEQSSTPTPVKKSSKLRQQIDIKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETETKVIILMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEITGKLGHFLKQAGFKESDVAFIPTSGLSGENLIARSQSSELTKWYKGLCLLEQIDSFKPPRRSVDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAVPPNETCTAKGITLHDEPVDWAAAGDHVSLTLVGIDVIKINVGCIFCGPKEPIKVCTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVVKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKDFKELGRFMLRYSGSTIAAGVVTEIKD*