Sequence detailsbmy_12344 (Coding sequence)

Part of scaffold_727 (SequenceType object (1))

For more information consult the page for scaffold_727 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SPTBENSTTRG00000001621 (Bottlenosed dolphin)

Gene Details

spectrin, beta, erythrocytic

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000001528, Bottlenosed dolphin)

Protein Percentage 88.98%
cDNA percentage 89.49%
Ka/Ks Ratio 0.14392 (Ka = 0.014, Ks = 0.0975)

SPTBENSBTAG00000004732 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000006213, Cow)

Protein Percentage 92.83%
cDNA percentage 92.78%
Ka/Ks Ratio 0.09702 (Ka = 0.033, Ks = 0.3405)

SPTB (Minke Whale)

Gene Details

spectrin, beta, erythrocytic

External Links

Gene match (Identifier: BACU010736, Minke Whale)

Protein Percentage 98.95%
cDNA percentage 98.8%
Ka/Ks Ratio 0.09677 (Ka = 0.0044, Ks = 0.0458)

Additional orthologs identified in other species via the OPTIC pipeline.

SPTB (Human)   Sptb (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 6036 bp    Location:69280..133905   Strand:+
Raw sequence 
>bmy_12344
ATGACGTCGGCCACGGAGTTTGAAAACGTGGGCAACCAGCCACCGTACAGCCGGATCARTGCCCGCTGGGATGCCCTGGACGATGAGCTGGATAATGACAGCAGCTCAGCCAGGCTCTTTGAGAGGTCCCGGATCAAGGCCTTGGCAGATGAGCGGGAAGTTGTTCAGAAGAAAACCTTCACAAAATGGGTGAACTCGCACCTGGCGCGTGTGTCCTGCCGCATCACTGACCTCTACAAGGACCTGCGGGATGGGAAGATGCTCATCAAGCTGCTGGAAGTGCTCTCTGGAGAGATGCTGCCAAAGCCCACGAAGGGGAAGATGCGCATCCACTGCCTGGAGAATGTGGACAAGGCCCTGCAGTTCCTGAAGGAGCAGCGTGTGCACCTGGAGAACATGGGCTCCCACGACATCGTGGACGGCAACCACCGCCTGGTCCTGGGCCTCATCTGGACCATCATCCTCCGCTTCCAGATTCAGGACATCGTTGTCCAAACTCAGGAAGGTCGTGAGACGCGCTCAGCCAAGGACGCGTTGCTGTTATGGTGTCAGATGAAGACGGCAGGCTACCCCCATGTCAACGTCACCAACTTCACCTCCAGCTGGAAGGATGGCCTAGCCTTTAACGCCCTGATCCACAAGCACCGGCCCGACCTGATTGACTTTGATAAGCTGAAGGACTCCAACGCCCGGCACAACCTGGAGTACGCGTTCGACGTGGCTGAGCGACAGCTGGGCATCATCCCACTCCTCGACCCTGAAGATGTCTTCACAGAAAACCCTGACGAGAAATCCATCATCACCTACGTGGTGGCGTTTTACCACTACTTCTCCAAGATGAAGGTGCTGGCAGTGGAGGGCAAGCGCGTTGGCAAGGTAATTGACCACGCCATTGAGACCGAGAAGATGATTGAAAAGTACAGCGGGCTGGCCTCAGACCTGCTCACCTGGATCGAGCAGACCATCACTGTCCTGAACAGCCGCAAGTTCGCCAACTCCCTGACCGGTGTCCAGCAGCAGCTGCAGGCCTTCAGTACCTACCGCACCGTGGAGAAGCCGCCCAAGTTTCAGGAGAAGGGGAATCTAGAAGTCCTACTTTTTACCATCCAGTCACGGATGAGAGCCAACAATCAGAAAGTGTACACGCCCCATGATGGGAAACTCGTGTCCGACATCAACCGGGCCTGGGAAAGCCTGGAGGAAGCTGAGTACCGGCGGGAGCTGGCTCTGAGGGAGGAGCTCATCCGGCAGGAGAAGCTAGAGCAGTTGGCCCGGCGCTTTGACCGAAAGGCTGCCATGAGAGAGACGTGGCTCAATGAAAACCAGCGGCTTGTGGCCCAGGATAATTTCGGGTACGACCTGGCAGCTGTGGAGGCCGCCAAGAAGAAGCACGAGGCCATTGAGACGGACACAGCTGCCTACGAGGAGCGGGTGAGGGCCCTGGAGGACCTGGCCCAGGAGCTGGAGCGGGAGAATTACCACGACCAGAAGCGCATCACGGCCCGTAAGGACAACGTCCTGCGCCTGTGGAACTACCTGCAGGAGCTGCTGCAGTCCCGGCGCCAGAGGCTTGAGAAGACGCTGGCCCTGCAGAAGCTCTTCCAGGACATGCTGCACAGCATCGACTGGATGGACGAGATCAAGGCTCACCTCTTGTCTGCCGAGTTCGGGAAGCACTTGTTGGAGGTCGAGGACTTGCTACAAAAACACAAGTTGATGGAGGCTGACATCGCCATCCAAGGGGACAAAGTGAAGGCCATCACCACAGCCACTCTAAAGTTCACTGAGGAGCCAGGGTACCAGCCTTGCGACCCACAGGTCATCCAGGACCGTGTCAGCCACCTGGAGCAGTGCTTCGAAGAGCTGAGCAACACGGCAGCCGGACGCAAGGCCCAGCTGGAGCAGTCCAAGCGGCTCTGGAAGTTCTTCTGGGAGATGGATGAGGCCGAGAGCTGGATCAAGGAGAAGGAGCAGATTTACTCCTCCCTGGACTATGGCAAGGACCTGACCAGCGTGCTCATCCTGCAGCGCAAGCACAAGGCCTTCGAGGATGAGCTGCGCGGGCTGGACGCCCACCTGGACCAGATCTTCCAGGAGGCTGAGGGCATGGTTGCACGCAAGCAGTTCGGGCACCCGCAGATCGAGGCCCAGATCAAGGAGGTGTCTGCCCAGTGGAACCAGCTGAAGGAGCTGGCTGCCTTCCGCAAGAAGAACCTCCAGGACGCTGAGAACTTCTTTCAGTTCCAGGGCGATGCGGACGATCTGAAGGCCTGGCTGCAAGATGCCCACCGGCTGCTCTCAGGAGAAGATGTGGGGCAGGATGAAGGGGCCACACAGGCCCTGGGGAAGAAGCACAAGGACTTTCTGGAGGAGCTAGAGGAGAGCCGCGGGGTGATGGAGCATCTGGAACAGCAGGCCCAGGGGTTCCCCCAAGAGTTTCGGGATTCCCCAGATGTGACCAACCGGCTGCAGGCCCTCCGGGATCTCTACCAGCAGGTGGTGGCCCAAGCGGACGTGCGTCGGCAGAGGCTGCAGGATGCCCTGGACCTGTACACGGTGTTTGGGGAGACGGATGCCTGTGAACTGTGGATGGGCGAGAAGGGGAAGTGGCTGGCCCAGATGGACATCCCAGACACGCTGGAGGACCTGGAGGTCGTGCAGCACAGGTTTGATATCCTGGACCAGGAGATGAAGACTTTGATGGCTCAGATTGATGGCGTGAACCTTGCTGCCAACAGCCTGGTAGAGAGTAGCCACCCACGCAGTGGGGAAGTGAAGAAGTGCCAGGACCACCTGAATACCAGGTGGCAGGAATTCCAGACCATGGTGTTGGAACGGCGGGAGGCTGTGGACTCGGCCCTCCGGGTGCACAGCTACTGCGTGGAGTGCGAGGAGACCAGCAAGTGGGTGGTGGACAAGACGAAGGTGGTGGAGTCTACAAGGGACCTGGGCCGGGACCTGGCGGGCGTCATCGCCATCCAGCGCAAGTTGTCGGGGCTGGAGCGTGACGTGGCCGCCATCCATGCCCGCGTGGATGCCCTGGAGCAGGAGTCGCGGCGGCTGATGGAGTCACACCCTGAGCTGAAGAAGGACATTGGCCAGCGGCAGGCGTATGTGGAGGAGCTGTGGCAGGCCCTGCAGCAAGCCCTGAAGAGCCAGGAGGCCTCGCTGGGGGAAGCCAGCCAGCTGCAGGCCTTCCTGCAGGATCTGGATGCGTTCCAGGCCTGGCTGTCCATGGCCCAGAAGGATGTGGCCTCCAAGGACATGCCCGAGTCCCTCCCAGAGGCCGAGCAGCTCCTGCAGCAGCACGCGGCCATCAAGGACGACATTGACAGGCACCAGAAGAGCTACGAGCAGGTCAAGGCATCCGGAGAGAAGGTGATCCATGGCCAGACGGACCCGGAGTACCTGCTCCTGGGCCAGCGGCTGGCTGGCCTGGATAAGGGCTGGGATGCCCTGCACCGGATGTGGGAGAGCCGCAGCCATGCCCTCACCCAGTGCCTCGGCTTCCAGGAGTTCCAGAAAGATGCCAAGCAGGCTGAAGCCATCCTCAGCAACCAGGAATATACTCTGGCTCACTTGGAGCCCCCAGACTCCCTAGAAGCTGCAGAGGCCAGGATCCGGAAGTTTGAGGAATTCTTGGTGTCTATGGAGAACAACCGGGATAAGGTTTTGAGTCCTGTGGACTCTGGAAACAAGCTGGTAGCTGAAGGAAACCTCTACTCAGACAAGATCAAGGAGAAGGTGCAGCTGATTGAGGACAGGCACAGGAAGAATGACGAGAAGGCCCAGGAGGCCTCGGTCCTTCTGAGAGACAACCTGGAACTCCAGAACTTCCTGCAGAACTGCCAGGAGCTCACTCTCTGGATCAATGACAAGCTGCTGACATCTCAGGATGTCTCCTATGATGAAGCTCGAAACCTTCACAACAAATGGCTGAAGCACCAGGCGTTCGTGGCAGAGCTGGCTTCCCACCAGGGGTGGCTAGAGAACATTGATGCAGAAGGAAAGCAGCTGATGGAGGAGAAGCCCCAGTTTGCGGCCCTGGTGTCCCAGAGGCTGGAAGCCTTGCACCGGCTCTGGGATGAGCTTCAGGCCACCACACAGGAGACGGCCCAGCACCTCTCAGCCGCCAGGAGCTCTGACCTGCGCTCGCAGACCCACGCCGACCTCAACAAGTGGATCAGGGCCATGGAGGACCAGCTACGGTCGGACGACCTGGGCAARGACCTGACCAGCGTCAACAGGATGCTGGCTAAGCTGAAGGCAAGTGAGCAGCGTGTGGAGGACCAAGTGAACGTGCGGAAGGTGGAGCTGGAGGAGCTGTTTGCCCAGATGCCCTCGCTGGGAGAGGAGGCAGGGCGTGAAGACTTGAGCATCGAGAAGCGGTTCCTGGACCTTCTGGAGCCCTTGGGGAGGAGGAAGAAGCAGCTGGAATCATCCAGAGCCAAGCTGCAGATCAGCCGGGACTTAGAGGATGAGACGCTCTGGGTGGAGGAGAGGCTGCCTCTGGCCCAGTCGACCGACTATGGCACAAACCTGCAAACTGTGCAGCTGTTCATGAAGAAGAACCAGACGCTGCAGAACGAGATCCTGGGCCACGCGCCGCGGGTGGAGGACGTGCTGCACAGAGGGCAGCAGCTGGTGGCCGCAGCCGAGATCGACTGCCGGGACGTGGAGGAGCGCCTGGGGCATCTGCAGGGCTCGTGGGACACACTGCGGGAGACGGCGACTGGCCGGCTGCAGCGCCTGCGGGATGCCAGCGAGGCACAGCAGTACTACCTGGACGCGGGCGAGGCCGAGGCCTGGATCAGTGAGCAGGAGTTCTACGTCTTCTCCGACGAGACCCCCCAGGATGAAGAGGGCGCCATCGTGATGTTGAAGCGGCACTTGCGGCAGCAACGCACAGTAGAGGAGTACGGGAGGAACATCAAGCAGCTGGCCGGCCGGGCCCAGAGCCTGCTGTCTGCAGGCCACCCCGAGGGGGAACAGATCATCAGACTTCAGGGGCAGGTGGACAAGCAGTACGCGGGGCTGAAGGACATGGCAGAGGAGCGCAGGCGGAAGCTGGAGAACATGTGCCACCTGTTCCAGCTGAAGAGGGAGGTGGAAGACCTGGAGCAGTGGATCACGGAGAAGGAGCTGGTGGCCTCCTCCCCAGAAATGGGGCAAGACTTTGACCACGTGACTCTGCTCCGGGACAAGTTCCGGGACTTTGCCCGGGAGACCGGGGCGATTGGGCAGGAGCGGGTGGACAACGTGAATGCCGTCATTGAGCGGCTCATCGACGCGGGCCACGCAGAGGCGGCCACCATCGCCGAGTGGAAGGACGGGCTGAACGAGATGTGGGCGGACCTGCTGGAGCTCATTGACACGCGCATGCAGCTGCTGGCCGCCTCCTATGACCTGCAGCGCTACTTCTACACTGGCGCCGAGATCCTGGGCCTCATTGATGAGAAGCACCGCGAGCTGCCTGAGGATGTGGGGCTGGACGCCAGCACCGCCGAGTCCTTCCACCGCGTGCACACAGCCTTCGAGCGGGAGCTCCACCTGCTGGGTGTGCAGGTACAGCAGTTCCAGGACGTGGCCACCCGCCTGCAGACAGCGTACGCTGGAGAGAAGGCGGACGCCATCCAGAACAAGGAGCAGGAGGTGTCTGCCGCGTGGCAGGCACTGCTCGATGCCTGCGCGGGGCGCCGCACCCAGCTGGTGGACACAGCGGACAAATTCCGCTTCTTCAGCATGGTCCGAGACCTCCTCTCCTGGATGGAGAGCATCATCCGGCAAATCGAGACCCAGGAGAAGCCCAGGGACGTCTCCTCGGTGGAACTGCTCATGAAGTATCACAAGGGCATTCTGGCGGAGATGGAAACGCGAAGCAAGAACTTCAGCGCCTGCCTGGAGCTGGGCGAGTCCTTGCTGCAGCGGCAACACCAAGCCTCGGATGAGATCAGGGAGAAACTGCAGCAGGTGGTGTCCAGGAGGAAGGAGATGAAGGAGAAGTGGAAGGCCCGCCAGGAGCAGCTCCACATGTGA

Related Sequences

bmy_12344T0 SequenceType object (3)

Length: 2012 aa      View alignments
>bmy_12344T0
MTSATEFENVGNQPPYSRIXARWDALDDELDNDSSSARLFERSRIKALADEREVVQKKTFTKWVNSHLARVSCRITDLYKDLRDGKMLIKLLEVLSGEMLPKPTKGKMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLVLGLIWTIILRFQIQDIVVQTQEGRETRSAKDALLLWCQMKTAGYPHVNVTNFTSSWKDGLAFNALIHKHRPDLIDFDKLKDSNARHNLEYAFDVAERQLGIIPLLDPEDVFTENPDEKSIITYVVAFYHYFSKMKVLAVEGKRVGKVIDHAIETEKMIEKYSGLASDLLTWIEQTITVLNSRKFANSLTGVQQQLQAFSTYRTVEKPPKFQEKGNLEVLLFTIQSRMRANNQKVYTPHDGKLVSDINRAWESLEEAEYRRELALREELIRQEKLEQLARRFDRKAAMRETWLNENQRLVAQDNFGYDLAAVEAAKKKHEAIETDTAAYEERVRALEDLAQELERENYHDQKRITARKDNVLRLWNYLQELLQSRRQRLEKTLALQKLFQDMLHSIDWMDEIKAHLLSAEFGKHLLEVEDLLQKHKLMEADIAIQGDKVKAITTATLKFTEEPGYQPCDPQVIQDRVSHLEQCFEELSNTAAGRKAQLEQSKRLWKFFWEMDEAESWIKEKEQIYSSLDYGKDLTSVLILQRKHKAFEDELRGLDAHLDQIFQEAEGMVARKQFGHPQIEAQIKEVSAQWNQLKELAAFRKKNLQDAENFFQFQGDADDLKAWLQDAHRLLSGEDVGQDEGATQALGKKHKDFLEELEESRGVMEHLEQQAQGFPQEFRDSPDVTNRLQALRDLYQQVVAQADVRRQRLQDALDLYTVFGETDACELWMGEKGKWLAQMDIPDTLEDLEVVQHRFDILDQEMKTLMAQIDGVNLAANSLVESSHPRSGEVKKCQDHLNTRWQEFQTMVLERREAVDSALRVHSYCVECEETSKWVVDKTKVVESTRDLGRDLAGVIAIQRKLSGLERDVAAIHARVDALEQESRRLMESHPELKKDIGQRQAYVEELWQALQQALKSQEASLGEASQLQAFLQDLDAFQAWLSMAQKDVASKDMPESLPEAEQLLQQHAAIKDDIDRHQKSYEQVKASGEKVIHGQTDPEYLLLGQRLAGLDKGWDALHRMWESRSHALTQCLGFQEFQKDAKQAEAILSNQEYTLAHLEPPDSLEAAEARIRKFEEFLVSMENNRDKVLSPVDSGNKLVAEGNLYSDKIKEKVQLIEDRHRKNDEKAQEASVLLRDNLELQNFLQNCQELTLWINDKLLTSQDVSYDEARNLHNKWLKHQAFVAELASHQGWLENIDAEGKQLMEEKPQFAALVSQRLEALHRLWDELQATTQETAQHLSAARSSDLRSQTHADLNKWIRAMEDQLRSDDLGKDLTSVNRMLAKLKASEQRVEDQVNVRKVELEELFAQMPSLGEEAGREDLSIEKRFLDLLEPLGRRKKQLESSRAKLQISRDLEDETLWVEERLPLAQSTDYGTNLQTVQLFMKKNQTLQNEILGHAPRVEDVLHRGQQLVAAAEIDCRDVEERLGHLQGSWDTLRETATGRLQRLRDASEAQQYYLDAGEAEAWISEQEFYVFSDETPQDEEGAIVMLKRHLRQQRTVEEYGRNIKQLAGRAQSLLSAGHPEGEQIIRLQGQVDKQYAGLKDMAEERRRKLENMCHLFQLKREVEDLEQWITEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAVIERLIDAGHAEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLQRYFYTGAEILGLIDEKHRELPEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYAGEKADAIQNKEQEVSAAWQALLDACAGRRTQLVDTADKFRFFSMVRDLLSWMESIIRQIETQEKPRDVSSVELLMKYHKGILAEMETRSKNFSACLELGESLLQRQHQASDEIREKLQQVVSRRKEMKEKWKARQEQLHM*