Sequence detailsbmy_12372 (Coding sequence)

Part of scaffold_725 (SequenceType object (1))

For more information consult the page for scaffold_725 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PCDHB16ENSBTAG00000015453 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000053109, Cow)

Protein Percentage 76.55%
cDNA percentage 80.41%
Ka/Ks Ratio 0.22037 (Ka = 0.1406, Ks = 0.6379)

Additional orthologs identified in other species via the OPTIC pipeline.

PCDHB3 (Human)   Pcdhb3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 4443 bp    Location:165235..173563   Strand:+
Raw sequence 
>bmy_12372
ATGGAGGCAGGAGAGAGAAAGAAATGCTTTCTGAAACAAAGGCAAGTCTTGATAYTCTTTGTCTTGCTGGGCATAGCTCAGGCTGGTTCTGAGCCTAGGCATTATTCAGTGGCTGAGGAAATGGACAGTGGCTCCTTTGTGGCCAATCTGTTGAAAGACTTGGGGCTGGAGGTAGACGATCTAGCTGCTCGGGCCCCCCGGGTCGTTTCCAAAGGGAAAAAAATGCCTTTGCATTTTGATAGGCAGACCGGGGATTTGTTGTTAAATGAGAAACTGGACCGGGAGGAGCTATGTGGCCCTACCAAGCCCTGTGTACTACCTTTCCAGATGTTACTGGAAAATCCCTTGAAGTTTTTCCAGGCTGAGCTACGGATTAGGGACATAAATGATCATTCTCCAGTTTTCCTAGACAAAGAAATAATATTGAAAATTTCAGAAAGTATCACTCCTGGAACTACTTTCCTAATAGAGCGTGCCCAGGACTTAGATCTGCACTATGAGGTGCATGTCCTAGAAAACAGCCCCATTGGCTCCCAGGTTGCCATTGTCTCTGCCAGAGATTTAGATATTGGAACCTATGGAGAAATATCTTATGTACTTTCCCARGCATCTGAGGATATTCGGAAAACATTTGGAATAAATGCAAAATCGGGAGAACTCCTTTTAACACAGGAACTGGATTTTGAATCTATTCAGACTTATACATTAAATATTCAGGCGACAGATGGTGGGGGCCTTTCTGGCAGTTGTGTGGTGTTTGTCCAAGTGATGGATTTGAATGACAACCCGCCGGAACTGACCATGTCAACGGTTATCAGTGAGATCCCAGAAAACTTGCAGGAGACCGTAATTGCTGTATTCAGCGTTTCAGATCCTGACTCAGGAGACAATGGAAGGATGGTTTGCTCCATCCAAGATGATCTTCCTTTCATTCTTAAACCCTCTGTTGAGAATTTTTACACTTTAGTCACAAACACAGCCCTGGACCGAGAAACAAGATCCGAATATAACATCACCATCACCGTCACAGATATGGGGACMCCRAGACTGAAAACCCAGCACAACATAACCGTGCTGGTGTCCGACGTCAACGACAACGCCCCCGCCTTCACCCAGACCTCCTACACCCTGTCCGTCCGCGAGAACAACAGCCCCGCCCTGCACATCGGCAGCGTCCGCGCCACAGACAGAGACGCGGGCGCCAACGCCCAGGTCACCTACTCGCTGCTGCCGCCCCTCGACGCGCACGTGCCCCTGGCCTCCCTGGTGTCCATCAACCCGGACAACGGCCACCTGTTCGCCCTGAGGTCCCTGGACTACGAGGCCCTGCGGGCGTTCGAGTTCCGCGTGGGCGCCGCCGACCGCGGCTCGCCCGCGCTCAGCAGCCAGGCGCTGGTGCGCGTGCTCGTGGCGGACGACAACGACAACGCGCCCTTCGTGCTGTACCCGCTGCAGAACGCCTCGGCGCCCTGCACCGAGCTGGTGCCCAGGGCGGCCGAGGCGGGCTACCTGGTGACCAAGGTGGTGGCGGTGGACGGCGACTCGGGCCAGAACGCCTGGCTCTCGTACCAGCTGCTCAAGGCCACGGAGCCCGGGCTGTTCGGCGTGTGGGCKCACAACGGCGAGGTGCGCACGGCCCGGCTGCTGAGCGAGCGCGACGCGGCCAAGCACAGGCTGGTGGTGCTGGTCAAGGACAACGGCGAGCCGCCGCTGTCGGCCAGCGTCACGCTGCACGTGCTGCTGGTGGACGGCTTCTCGCAGCCCTACCTGCCGGCCCCGGAAGCGGAAGCGGCGGACGCGGCGCCGGCCGCCCCTCTCACCGTCTACCTGGTGGTCGCCTTGGCGTCGGTGTCGTCGCTCTTCCTCTTCTCGGTGCTGGTGTTCGTCGCGGTGCGGCTGTGCAGGAGGGGCGGGGCGGCCTCGGTGGGTCGCTGCTCGGTGCCCGAGGGCCCCTTTCCGGGCCACCTGGTGGACGTCAGCGGCACGGGGACCCTGTCCCAGAGCTACCAGTACGAGGTGTGTCTGACCGGAGGCTCCGGGACTTCCAAGTTCTTCAAGCCGATTATCCCAAACTTCCTTACTCAGGATGAGGAGAGGGCCGGAGGAGAGCGCTTTCTTAGACAAAGGCAAGTCCTGTTTCTCTTTGTTTTTCTGGGTGGGTCTCTGGCTGGGTCCCAGTCGAGACGCTACTCTGTGGCTGAGGAAAAAGAGAGGGGGTTTTTAATCTCCAATCTAGCAAAGGATCTGGGGCTGAGTGTAGGGAAACTGGCCGCGAGGGGGGCCCAAGTTGTGTCTAAAGGGAACAGACAGCATTTTCAGCTCAACCATCAGACCGGTGATTTGCTCCTGCATGAGAAATTGGACCGGGAGGAGCTATGCGGCTCCGCAGAGCCATGCATACTGCATTTTCAGATATTACTGCAAAACCCCTTGCAGTTTATTACAAATGAGCTCCAGGTCATAGACGTAAATGACCATTCTCCGGCATTCTCTGAAAATGAAATGCAGCTGAAAATCCTAGAAAACACTCCACCAGGAACAATAATTCCTTTGGGAAATGCTGAAGACTTGGATGTGGGAAGAAACAGTCTCCAAAACTACACGATCACTCCTAATTCCCATTTCCACGTTCTCACACGCAGTCGTAGGGATGGAAGGAAGTACCCAGAACTAGTACTAGACAAAGCGCTGGATCGTGAGGAGCAGCCAGAGCTTAGGTTAATGCTCACTGCGCTGGATGGCGGGACTCCACGGAGGTCTGGGACCGTCCAGGTTCACATCCTGGTCTTAGACATAAACGACAACACCCCAGAATTTACACAGTCCCTCTATGAGGTTCAAGTTCTAGAGAACAGCCCCGTTAACTCTCTTATTGTCACTGTTTCAGCTTCTGACTTAGATACAGGAAATTTGGGGACAATATCATATGCATTTTTTCATGTTTCTGAAGAAATTAGAAAAACTTTTCAACTAAATCCAGTTACTGGTGATATCCGACTAATCAAATATTTGAATTTTGAGGCGATCCAAACTTACGAAGTGGACATAGAAGCCAAGGATGGTGGAGGCCTTTCAGGAAAATCAACAGTGATAGTTCAGGTGGTTGATGTGAATGACAACCCACCAGAACTGACCTTGTCCTCAATTACCAGCCCTATCCCAGAGAACTCGCCAGAGACTGTGGTGGCTGTTTTCAGTGTTTCCGACCTAGACTCTGGAGACAATGGGAAAATGGTGTGTTCCATCGAGAACGATCTCCCCTTCATCCTGAAACCATCTGTAGAGAATTTTTATACCCTAGTGTCAGAAGGAGAGCTGGACAGAGAGATCAGAGCCGAGTACAACATCACCATCACCGTCACAGATATGGGGACCCCGAGACTGAAAACCCAGCACAACATAACCGTGCTGGTGTCCGACGTCAACGACAACGCCCCCGCCTTCACCCAGACCTCCTACACCCTGTCCGTCCGCGAGAACAACAGCCCCGCCCTGCACATCGGCAGCGTCCGCGCCACAGACAGAGACGCGGGCGCCAACGCCCAGGTCACCTACTCGCTGCTGCCGCCCCTCGACGCGCACGTGCCCCTGGCCTCCCTGGTGTCCATCAACCCGGACAACGGCCACCTGTTCGCCCTGAGGTCCCTGGACTACGAGGCCCTGCGGGCGTTCGAGTTCCGCGTGGGCGCCGCCGACCGCGGCTCGCCCGCGCTCAGCAGCCAGGCGCTGGTGCGCGTGCTCGTGGCGGACGACAACGACAACGCGCCCTTCGTGCTGTACCCGCTGCAGAACGCCTCGGCGCCCTGCACCGAGCTGGTGCCCARGGCGGCCGAGGCGGGCTACCTGGTGACCAAGGTGGTGGCGGTGGACGGCGACTCGGGCCAGAACGCCTGGCTCTCGTACCAGCTGCTCAAGGCCACGGAGCCCGGGCTGTTCGGCGTGTGGGCGCACAACGGCGAGGTGCGCACGGCCCGGCTGCTGAGCGAGCGCGACGCAGCCAAGCACAGGCTGCTGGTGCTGGTCAAGGACAACGGCGAGCCGCCGCTGTCGGCCAGCGTCACGCTGCACGTGCTGCTGGTGGACGGCTTCTCGCAGCCCTACCTGCYGGCCCCGGAAGCGGAAGCGGCGGACGCGGCGCCGGCCGCCCCTCTCACCGTCTACCTGGTGGTCGCCTTGGCGTCGGTGTCGTCGCTCTTCCTCTTCTCGGTGCTGGTGTTCGTCGCGGTGCGGCTGTGCAGGAGAGGCGGGGAGGCCTCGGTGGGTCGCTGCTCGGTGCCCGAGGGCCCCTTTCCGGGCCACCTGGTGGACGTCAGCGGCACGGAGACCCTGTCCCAGAGCTACCAGTACGAGGTGTGTCTGACGGGAGGCTCCGGGTTAAATGAGTTTAAATTCCTGAAGCCGATTCTCCCTAGTGGTCTGATTCAAGACACTGGGCAGGACTAG

Related Sequences

bmy_12372T0 SequenceType object (3)

Length: 1481 aa      View alignments
>bmy_12372T0
MEAGERKKCFLKQRQVLIXFVLLGIAQAGSEPRHYSVAEEMDSGSFVANLLKDLGLEVDDLAARAPRVVSKGKKMPLHFDRQTGDLLLNEKLDREELCGPTKPCVLPFQMLLENPLKFFQAELRIRDINDHSPVFLDKEIILKISESITPGTTFLIERAQDLDLHYEVHVLENSPIGSQVAIVSARDLDIGTYGEISYVLSQASEDIRKTFGINAKSGELLLTQELDFESIQTYTLNIQATDGGGLSGSCVVFVQVMDLNDNPPELTMSTVISEIPENLQETVIAVFSVSDPDSGDNGRMVCSIQDDLPFILKPSVENFYTLVTNTALDRETRSEYNITITVTDMGTPRLKTQHNITVLVSDVNDNAPAFTQTSYTLSVRENNSPALHIGSVRATDRDAGANAQVTYSLLPPLDAHVPLASLVSINPDNGHLFALRSLDYEALRAFEFRVGAADRGSPALSSQALVRVLVADDNDNAPFVLYPLQNASAPCTELVPRAAEAGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPLSASVTLHVLLVDGFSQPYLPAPEAEAADAAPAAPLTVYLVVALASVSSLFLFSVLVFVAVRLCRRGGAASVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTSKFFKPIIPNFLTQDEERAGGERFLRQRQVLFLFVFLGGSLAGSQSRRYSVAEEKERGFLISNLAKDLGLSVGKLAARGAQVVSKGNRQHFQLNHQTGDLLLHEKLDREELCGSAEPCILHFQILLQNPLQFITNELQVIDVNDHSPAFSENEMQLKILENTPPGTIIPLGNAEDLDVGRNSLQNYTITPNSHFHVLTRSRRDGRKYPELVLDKALDREEQPELRLMLTALDGGTPRRSGTVQVHILVLDINDNTPEFTQSLYEVQVLENSPVNSLIVTVSASDLDTGNLGTISYAFFHVSEEIRKTFQLNPVTGDIRLIKYLNFEAIQTYEVDIEAKDGGGLSGKSTVIVQVVDVNDNPPELTLSSITSPIPENSPETVVAVFSVSDLDSGDNGKMVCSIENDLPFILKPSVENFYTLVSEGELDREIRAEYNITITVTDMGTPRLKTQHNITVLVSDVNDNAPAFTQTSYTLSVRENNSPALHIGSVRATDRDAGANAQVTYSLLPPLDAHVPLASLVSINPDNGHLFALRSLDYEALRAFEFRVGAADRGSPALSSQALVRVLVADDNDNAPFVLYPLQNASAPCTELVPXAAEAGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLLVLVKDNGEPPLSASVTLHVLLVDGFSQPYLXAPEAEAADAAPAAPLTVYLVVALASVSSLFLFSVLVFVAVRLCRRGGEASVGRCSVPEGPFPGHLVDVSGTETLSQSYQYEVCLTGGSGLNEFKFLKPILPSGLIQDTGQD*