Part of scaffold_725 (Scaffold)

For more information consult the page for scaffold_725 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PCDHB5 ENSTTRG00000002341 (Bottlenosed dolphin)

Gene Details

protocadherin beta 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002193, Bottlenosed dolphin)

Protein Percentage 80.13%
cDNA percentage 80.88%
Ka/Ks Ratio 0.31218 (Ka = 0.0125, Ks = 0.04)

PCDHB7 ENSBTAG00000039433 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009669, Cow)

Protein Percentage 77.14%
cDNA percentage 81.45%
Ka/Ks Ratio 0.24549 (Ka = 0.1372, Ks = 0.5591)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2391 bp    Location:198127..200517   Strand:+
>bmy_12374
ATGGAGACTGCACCAGCAAAAACGCTACAGAAAAGGCAAGTTATCTTTCTTGCTATATTGTTGCTTTTGTGGGAGGCTGGCTCTGAAGCAGTTAGGTATTCCATGCCAGAAGAAACAGAAAGTGGGTCTTTTGTGGCCACCCTGGCAAAAGACCTGGGGCTCAGGGTGGGGGAACTGGCCACTCGGGGCGCGCGAATCCATTACAAAGGAAATAAACAGCTCTTGCAGCTGGATGTAACGACCGGGAATTTGCTTCTATGTGAAAAACTAGACCGGGAGGTGCTGTGTGGGGCGACCGATCCCTGCATACTGCATTTCCAACTATTACTGGAAAACCCGGTGCAGTTTTTTCAAGCTGATCTGCAGCTCACAGATATAAATGACCATTCCCCAGAGTTCCTCGAGAGGGAAATGCTCCTAAAAATCCCAGAAAACGTCCAGACAGGGACTGTGTTTCCTTTGAAAATAGCTCAGGACTTTGACATAGGTAGCAACACTATTCAGAATTACACAATCAGCCCCAACTCCCATTTTCATGTTGTCACTCATAATCGCGGAGATGGCAGAAAATACCCAGAGCTGGTGCTGGACAAACCGCTGGATCGGGAGGAAGGGCCTGAGCTCAGTTTAACCCTAACGGCGCTGGATAGTGGGGCTCCGCCCAGGTCCGGGACCACTGCAGTCCGCATTGAAGTCGTGGACATCAATGACAACGCCCCTGAGTTTTTACAGTCGGTCTATGAGGTACAGATTCCGGAGAACAGCCCCCTAAACTCCTTAGTTGTCGCTGTCTCCGCCCGAGATTTAGATGCAGGAACGAATGGGAATGTAGCCTACGCTCTATTCCAAGGTGATGAAGTTACTCAACTATTTGTAATAGACGAAATAACAGGAGAAATTCGTCTGAAAAGGGCATTGGATTTCGAGTCAACTCGATATTATAACGTGGAGATTGCAGCCACAGACGGCGGGGGCCTTTCAGGAAAATGCACTGTAGTTATAGAGGTGGTGGATGTGAACGACAACGTCCCTGAACTGACCATGTCGACGCTCACCAGCTCTACCCCAGAAAACTCCCCAGAGACTGTGGTGGCCGTTTTCAGTGTTTCTGATCCAGATACCGGGGACAACGGTAGGATGGTTTGCTCCATCCAGAATGATCTCCCCTTTCTCTTGAAACCCACATTCAAAAACTTTTACACCCTAGTGACCGAGAGGCCATTGGACAGAGAGAGCAGAGCGGAATACAACGTCACCATCACCGTCACAGATATGGGGACACCGAGACTGAAAACCCAGCACAACATAACCGTGCTGGTGTCCGACGTCAACGACAACGCCCCCGCCTTCACCCAGACCTCCTACACCCTGTCCGTCCGCGAGAACAACAGCCCCGCCCTGCACATCGGCAGCGTCCGCGCCACAGACAGAGACGCGGGCGCCAACGCCCAGGTCACCTACTCGCTGCTGCCGCCCCTCGACGCGCACGTGCCCCTGGCCTCCCTGGTGTCCATCAACCCGGACAACGGCCACCTGTTCGCCCTGAGGTCCCTGGACTACGAGGCCCTGCGGGCGTTCGAGTTCCGCGTGGGCGCCGCCGACCGCGGCTCGCCCGCGCTCAGCAGCCAGGCGCTGGTGCGCGTGCTCGTGGCGGACGACAACGACAACGCGCCCTTCGTGCTGTACCCGCTGCAGAACGCCTCGGCGCCCTGCACCGAGCTGGTGCCCAGGGCGGCCGAGGCGGGCTACCTGGTGACCAAGGTGGTGGCGGTGGACGGCGACTCGGGCCAGAACGCCTGGCTCTCGTACCAGCTGCTCAAGGCCACGGAGCCCGGGCTGTTCGGCGTGTGGGCGCACAACGGCGAGGTGCGCACGGCCCGGCTGCTGAGCGAGCGCGACGCGGCCAAGCACAGGCTGGTGGTGCTGGTCAAGGACAACGGCGAGCCGCCGCTGTCGGCCAGCGTCACGCTGCACGTGCTGCTGGTGGACGGCTTCTCGCAGCCCTACCTGCCGGCCCCGGAAGCGGAAGCGGCGGACGCGGCGCCGGCCGCCCCTCTCACCGTCTACCTGGTGGTCTCCTTGGCGTCGGTGTCGTCGCTCTTCCTCTTCTCGGTGCTGGTGTTCGTCGCGGTGCGGCTGTGCAGGMGGRGCGGGGCGGCCTCGGTGGGTCGCTGCTCGGTGCCCGAGGGCCCCTTTCCGGGCCACCTGGTGGACGTCAGCGGCACGGGGACCCTGTCCCAGAGCTACCAGTACGAGGTGTGTCTGACGGGAGGCTCCGGGTTAAATGAGTTTAAATTCTTGAAGCCGATTCTCCCCAACCTCCCACCCCAGGGCGCTGGTGAAGAAATAGAGGAAAACGCCAACTTCCGGAATAGCTTTGGATTCAGTTAG

Related Sequences

bmy_12374T0 Protein

Length: 797 aa      View alignments
>bmy_12374T0
METAPAKTLQKRQVIFLAILLLLWEAGSEAVRYSMPEETESGSFVATLAKDLGLRVGELATRGARIHYKGNKQLLQLDVTTGNLLLCEKLDREVLCGATDPCILHFQLLLENPVQFFQADLQLTDINDHSPEFLEREMLLKIPENVQTGTVFPLKIAQDFDIGSNTIQNYTISPNSHFHVVTHNRGDGRKYPELVLDKPLDREEGPELSLTLTALDSGAPPRSGTTAVRIEVVDINDNAPEFLQSVYEVQIPENSPLNSLVVAVSARDLDAGTNGNVAYALFQGDEVTQLFVIDEITGEIRLKRALDFESTRYYNVEIAATDGGGLSGKCTVVIEVVDVNDNVPELTMSTLTSSTPENSPETVVAVFSVSDPDTGDNGRMVCSIQNDLPFLLKPTFKNFYTLVTERPLDRESRAEYNVTITVTDMGTPRLKTQHNITVLVSDVNDNAPAFTQTSYTLSVRENNSPALHIGSVRATDRDAGANAQVTYSLLPPLDAHVPLASLVSINPDNGHLFALRSLDYEALRAFEFRVGAADRGSPALSSQALVRVLVADDNDNAPFVLYPLQNASAPCTELVPRAAEAGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPLSASVTLHVLLVDGFSQPYLPAPEAEAADAAPAAPLTVYLVVSLASVSSLFLFSVLVFVAVRLCRRXGAASVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGLNEFKFLKPILPNLPPQGAGEEIEENANFRNSFGFS*