Sequence details bmy_12380 (Coding sequence)

Part of scaffold_725 (Scaffold)

For more information consult the page for scaffold_725 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PCDHB15 ENSBTAG00000039067 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000048796, Cow)

Protein Percentage 82.21%
cDNA percentage 84.59%
Ka/Ks Ratio 0.29868 (Ka = 0.1139, Ks = 0.3814)

Additional orthologs identified in other species via the OPTIC pipeline.

PCDHB15 (Human)   Pcdhb22 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1560 bp    Location:272853..301394   Strand:+
Raw sequence 
>bmy_12380
ATGGAGGCCGGAGGGGAGCGCTTTCCTAAACAAAGGCAAGTCCTGATTCTCTTTCTCTTGCTGGGAGTGGCTCTGGCAGGCTGGGAATCCCGTCGCTATTTCGTGATGGAGGAAACTGAGAGCGGCTCCTTTGTGGCCAATCTTGCTGAGGACCTGGGGCTGGGAGTGGGGGAGCTAGCTGCGCGAGAAGCCCGGGTGGTCTCCGAGGACAACGAACCCTGGTTGCAGCTTGATCTACAGACTGGGGAGTTGATATTAAGTGAGAAACTGGACCGGGAGGAGATGTGCGGCCCCACAGATCCATGTGTAATGCATTTCCAAGTGTTACTGAAAAAGCCACTGGGAGTATTTCGAGCTGAGCTACTGGTGAGAGACATAAACGATCATTCTCCTGAGTTTCCTGAAAAAGAAATGACGCTGAAAATCCTAGAGACTAGCCCTCCTGGGACCGTGTTTCCTCTGAAAACAGCTCAGGATTTGGACGTGGGCAACAACAACATCCAAAACTACAGTATCAGTCACAACTCTTACTTCCATGTTTCCACCCGCAACTGGGGGGACGGCAGGAAATACCCAGAGCTGGTGCTGGACAAAGAGCTGGATCGCGAAGAGCAGGCCGAGCTCAGATTAACCCTCACAGCGCTGGATGGCGGCTCTCCGCCCAGGTCTGGCACCGCCCAGGTCCGAATCTTGGTCTTGGACGTTAATGACAACGCCCCTGAGTTTGCACAGACGCACTACCAGGTGCAGGTCCCAGAGAACAGCCCTGTAGGCACCCTAGTTGTCAAGGTCTCAGCTAGGGATTTGGACACTGGAACAAACGGAGAAATATCATATTCCCTTTTTTATAGTTCTCAAGAGATAAGCACAACTTTTGAACTAAGCAGCATTTCAGGAGAAGTTCGACTAATTAAAAAACTAGATTTTGAGACAATATCCTCATATGAGCTGTATATAGATGCGTCTGATGGTGGGGGACTTTCTGGAAAATGCTCTGTCTCCATTGAGGTGATGGATGTTAACGATAACTCCCCAGAACTAACTATTTCATCACTTACCAGCCCCATTCCTGAAAATTCCCCCGAGACAGAAGTGGCCCTGTTTAGGATTCGAGACCGAGACTCAGGGGACAACGGAAGGATGACTTGCTCCATCCAGGATGATCTCCCCTTCCTCCTGAAACCATCTGCAGAGAATTTCTACACCCTAGTAACAAATGGGGCGCTGGACAGAGAGAGTAAAGCCCAATATAATATCACCATCACCGTCACAGATATGGGAACCCCCAGGCTGAAAACCGAGCACAACATAACCGTGCTGGTGTCCGACGTCAACGACAACGCCCCCGCCTTCACCCAGACCTCCTACACCCTGTCCTGTAAAGTAACCCAGCGCAGGACTCGCGGACGACGCCGGTTGAAACCAAACGCACAGTCGGGTCACAACTGGCGCTGCCTGGGCTCCACTGAGAGCTGCTGTCCCCACTCCCCAGATGTGGAGGACCACCCCAGTTTCATCTCAGGGGTCCGGTCCATTTCTTCCCATACGGCAGCTGTCTAG

Related Sequences

bmy_12380T0 Protein

Length: 520 aa      View alignments
>bmy_12380T0
MEAGGERFPKQRQVLILFLLLGVALAGWESRRYFVMEETESGSFVANLAEDLGLGVGELAAREARVVSEDNEPWLQLDLQTGELILSEKLDREEMCGPTDPCVMHFQVLLKKPLGVFRAELLVRDINDHSPEFPEKEMTLKILETSPPGTVFPLKTAQDLDVGNNNIQNYSISHNSYFHVSTRNWGDGRKYPELVLDKELDREEQAELRLTLTALDGGSPPRSGTAQVRILVLDVNDNAPEFAQTHYQVQVPENSPVGTLVVKVSARDLDTGTNGEISYSLFYSSQEISTTFELSSISGEVRLIKKLDFETISSYELYIDASDGGGLSGKCSVSIEVMDVNDNSPELTISSLTSPIPENSPETEVALFRIRDRDSGDNGRMTCSIQDDLPFLLKPSAENFYTLVTNGALDRESKAQYNITITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLSCKVTQRRTRGRRRLKPNAQSGHNWRCLGSTESCCPHSPDVEDHPSFISGVRSISSHTAAV*