Sequence detailsbmy_12380 (Coding sequence)

Part of scaffold_725 (SequenceType object (1))

For more information consult the page for scaffold_725 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PCDHB15ENSBTAG00000039067 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000048796, Cow)

Protein Percentage 82.21%
cDNA percentage 84.59%
Ka/Ks Ratio 0.29868 (Ka = 0.1139, Ks = 0.3814)

Additional orthologs identified in other species via the OPTIC pipeline.

PCDHB15 (Human)   Pcdhb22 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1560 bp    Location:272853..301394   Strand:+
Raw sequence 
>bmy_12380
ATGGAGGCCGGAGGGGAGCGCTTTCCTAAACAAAGGCAAGTCCTGATTCTCTTTCTCTTGCTGGGAGTGGCTCTGGCAGGCTGGGAATCCCGTCGCTATTTCGTGATGGAGGAAACTGAGAGCGGCTCCTTTGTGGCCAATCTTGCTGAGGACCTGGGGCTGGGAGTGGGGGAGCTAGCTGCGCGAGAAGCCCGGGTGGTCTCCGAGGACAACGAACCCTGGTTGCAGCTTGATCTACAGACTGGGGAGTTGATATTAAGTGAGAAACTGGACCGGGAGGAGATGTGCGGCCCCACAGATCCATGTGTAATGCATTTCCAAGTGTTACTGAAAAAGCCACTGGGAGTATTTCGAGCTGAGCTACTGGTGAGAGACATAAACGATCATTCTCCTGAGTTTCCTGAAAAAGAAATGACGCTGAAAATCCTAGAGACTAGCCCTCCTGGGACCGTGTTTCCTCTGAAAACAGCTCAGGATTTGGACGTGGGCAACAACAACATCCAAAACTACAGTATCAGTCACAACTCTTACTTCCATGTTTCCACCCGCAACTGGGGGGACGGCAGGAAATACCCAGAGCTGGTGCTGGACAAAGAGCTGGATCGCGAAGAGCAGGCCGAGCTCAGATTAACCCTCACAGCGCTGGATGGCGGCTCTCCGCCCAGGTCTGGCACCGCCCAGGTCCGAATCTTGGTCTTGGACGTTAATGACAACGCCCCTGAGTTTGCACAGACGCACTACCAGGTGCAGGTCCCAGAGAACAGCCCTGTAGGCACCCTAGTTGTCAAGGTCTCAGCTAGGGATTTGGACACTGGAACAAACGGAGAAATATCATATTCCCTTTTTTATAGTTCTCAAGAGATAAGCACAACTTTTGAACTAAGCAGCATTTCAGGAGAAGTTCGACTAATTAAAAAACTAGATTTTGAGACAATATCCTCATATGAGCTGTATATAGATGCGTCTGATGGTGGGGGACTTTCTGGAAAATGCTCTGTCTCCATTGAGGTGATGGATGTTAACGATAACTCCCCAGAACTAACTATTTCATCACTTACCAGCCCCATTCCTGAAAATTCCCCCGAGACAGAAGTGGCCCTGTTTAGGATTCGAGACCGAGACTCAGGGGACAACGGAAGGATGACTTGCTCCATCCAGGATGATCTCCCCTTCCTCCTGAAACCATCTGCAGAGAATTTCTACACCCTAGTAACAAATGGGGCGCTGGACAGAGAGAGTAAAGCCCAATATAATATCACCATCACCGTCACAGATATGGGAACCCCCAGGCTGAAAACCGAGCACAACATAACCGTGCTGGTGTCCGACGTCAACGACAACGCCCCCGCCTTCACCCAGACCTCCTACACCCTGTCCTGTAAAGTAACCCAGCGCAGGACTCGCGGACGACGCCGGTTGAAACCAAACGCACAGTCGGGTCACAACTGGCGCTGCCTGGGCTCCACTGAGAGCTGCTGTCCCCACTCCCCAGATGTGGAGGACCACCCCAGTTTCATCTCAGGGGTCCGGTCCATTTCTTCCCATACGGCAGCTGTCTAG

Related Sequences

bmy_12380T0 SequenceType object (3)

Length: 520 aa      View alignments
>bmy_12380T0
MEAGGERFPKQRQVLILFLLLGVALAGWESRRYFVMEETESGSFVANLAEDLGLGVGELAAREARVVSEDNEPWLQLDLQTGELILSEKLDREEMCGPTDPCVMHFQVLLKKPLGVFRAELLVRDINDHSPEFPEKEMTLKILETSPPGTVFPLKTAQDLDVGNNNIQNYSISHNSYFHVSTRNWGDGRKYPELVLDKELDREEQAELRLTLTALDGGSPPRSGTAQVRILVLDVNDNAPEFAQTHYQVQVPENSPVGTLVVKVSARDLDTGTNGEISYSLFYSSQEISTTFELSSISGEVRLIKKLDFETISSYELYIDASDGGGLSGKCSVSIEVMDVNDNSPELTISSLTSPIPENSPETEVALFRIRDRDSGDNGRMTCSIQDDLPFLLKPSAENFYTLVTNGALDRESKAQYNITITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLSCKVTQRRTRGRRRLKPNAQSGHNWRCLGSTESCCPHSPDVEDHPSFISGVRSISSHTAAV*