Sequence detailsbmy_12391 (Coding sequence)

Part of scaffold_725 (SequenceType object (1))

For more information consult the page for scaffold_725 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PCDHGB4ENSBTAG00000017349 (Cow)

Gene Details

protocadherin gamma-B4 precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000048790, Cow)

Protein Percentage 78.8%
cDNA percentage 81.41%
Ka/Ks Ratio 0.26242 (Ka = 0.1345, Ks = 0.5125)

Genome Location

Sequence SequenceType object (2)

Length: 2451 bp    Location:401443..403893   Strand:+
Raw sequence 
>bmy_12391
ATGGCCGCTCCAACGAATCGCCTGCACCACAGAAGACTGGTCCTGTTGTGCCTTTTCCTGGGGAGGCTGTGGGAGACCGGGGCTAGCCAGATCCGCTACTCGGTACCTGAAGAGACAGAAGAAGGCTATATCGTGGGGAATATCTCCAAGGATCTGGGGCTGGAGCTCCGCGAGCTGGCGGAGCGGGGAGTCCGCATCGTCTCCAGAGGTAGGACGCAGCGCTTTGCTCTGAACCCGCGAAGCGGCAGCTTGGTAACCGCGGGCAGGATAGACCGGGAGGAGCTCTGCGCTCAGAGCGCGCGGTGTCTGGTGAACTTTAAAGTCCTGGTTGAAGACAGGGTGCAGCTTCACGGAATAGAAATAGAAGTAACTGATATCAACGATAATAATCCGAAATTCCAGGTCGAAAATCTAGAAGTAAAAATTAACGAAATTGCTTTGCCCGGAACACGTTATCCACTCCCAGACGCTGTTGACCCCGATGTGGGCTTGAATTCCCTGCAGAGCTATCAGCTCAGCCCCAATCACCACTTCTCCCTGGACGTGCAAACTGGAGACGACGGAACTATAAGCCCAGAGCTGGTGCTGGAGCGTGCCCTGGACCGCGAGGAGGAAGCTGCTCACCATCTGGTCCTCGTCGCCTCCGATGGCGGCGAACCGCGTCGCTCTAGCACAGTGCACATCCGAGTGACAGTGTTGGATACAAACGACAATGCCCCGGTTTTTGCTCAACCGGTTTACCGAGTGAAAGTCCCAGAGAACGTGCCCCCGGGCACCYRGCTGCTTACTGTAAGCGCTAGCGACCCGGATGAGGGAACCAACGGAGAAGTGGCTTATAAATTCTGGAAAATTAGTGAAAAACAATCTCCGTTATTCCAGCTTAATGGAAATACTGGCGAAATATCAACAGCAAAGAGTTTAGATTATGAAGAATGTGCATTTTATGACATGGAAATACAGGCTGAAGATGGTGGGGCATTGAAGGATTGGACCAAAGTACTCATTTCAGTGGAAGATGTCAATGACAATAGACCCGAAGTGACAATTACATCTTTGTTTAGTCCAGTGAGGGAAGATGCTCCTCAAGGAACAGTAATTGTTCTTTTCAATGCACATGACCGAGACTCTGGGAAGAATGGCCAAGTTGTCTGTTCCATCAAGGAGATTCTACCTTTTCAATTAGAAAAGTCAGTAGAAGATTATTATAGATTGTTGACAGTCCGAAATCTTGACCGAGAAAAAACCTCTGAATATAACATCACAGTGACCGCAACAGACAGAGGAACACCATCCCTGTCCATGGAAATTCACATCACCCTGCACGTGGTCGACGTCAACGACAATCCACCCTCCTTCTCTCAAACCTCCTACTCAGTCTTTCTCCCTGAGAACAACCTTAGAGGCACCTCCATCTTCTCGGTGACAGCCCAAGACCCCGACAGCAATGAGAACGCTCGGGTTGTTTACTCCTTAGTCGAAGACACCATCCAAGGGGCGCCTCTCTCCTCCTATGTCTCCATCAACTCCAACACTGGTGTGCTATACGCGCTGCACTCCTTCGACTACGAGCAATTTCGCGATCTTCAAATGCAGGTGAGGGCAAGCGACAGCGGGGACCCACCTCTCAGCAGCAACGTGTCACTGAGCTTGTTCGTGCTGGACCAGAACGACAATATGCCAGAAATCCTGTACCCCATGCTTCCCACCGATGGCTCCACGGGTGTGGAGCTGGCACCCCGCTCTGCAGAGCCCGGATACCTGGTGACCAAGGTGGTGGCTGTGGACCAAGACTCAGGCCAGAACGCCTGGCTGTCCTACCGCCTCCTCAAGGCCAGCGAGCCAGGGCTCTTCGCGGTGGGGCTGCACACGGGCGAGGTGCGCACAGCGCGGGCCCTGCTGGACAGAGACGCGCTTAAGCAGAGCCTGGTGGTGGCGGTCCAGGACCACGGGCGGCCCCCTCTCTCAGCCACTGTCACGCTCACAGTGGCAGTAGCGGACAGCATCCCCGACGTCCTGGCTGAACTAGGCAGCYTTGAGTCTCCCGCCAGCCCTGACGACTCAGGCCTCACGCTGTACCTGGTGGTGGCGGTGGCCGCGGTCTCCTGCGTCTTCCTCGCGTTTGTCATTGTGCTGTTGGCGCTCAGGCTGAGGCGCTGGCACACGTCGCATCTGCTCCAGGCTTCAGCAGGCGGGTTAGCGGGTGTGCCCACGTCTCACTTTGTGGGCGTGGACGGGGTGCGGGCTTTCCTGCAGACCTATTCCCACGAGGTCTCGCTCACAGCAGACTCGCGGAGGAGTCACGTGATCTTCCCGCAGCCCAACTACGCGGACACGCTCGTCAGCCAGGAGAGCTGTGAGAAAAGCGAGCCTTTGTGCGCTTCAGATGATTCCAGGTTTCCTATAGAAGACACCCCTTTGGTTCCAGTGAGTTCAATTTTTCCTTTACTTTAA

Related Sequences

bmy_12391T0 SequenceType object (3)

Length: 817 aa      
>bmy_12391T0
MAAPTNRLHHRRLVLLCLFLGRLWETGASQIRYSVPEETEEGYIVGNISKDLGLELRELAERGVRIVSRGRTQRFALNPRSGSLVTAGRIDREELCAQSARCLVNFKVLVEDRVQLHGIEIEVTDINDNNPKFQVENLEVKINEIALPGTRYPLPDAVDPDVGLNSLQSYQLSPNHHFSLDVQTGDDGTISPELVLERALDREEEAAHHLVLVASDGGEPRRSSTVHIRVTVLDTNDNAPVFAQPVYRVKVPENVPPGTXLLTVSASDPDEGTNGEVAYKFWKISEKQSPLFQLNGNTGEISTAKSLDYEECAFYDMEIQAEDGGALKDWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVIVLFNAHDRDSGKNGQVVCSIKEILPFQLEKSVEDYYRLLTVRNLDREKTSEYNITVTATDRGTPSLSMEIHITLHVVDVNDNPPSFSQTSYSVFLPENNLRGTSIFSVTAQDPDSNENARVVYSLVEDTIQGAPLSSYVSINSNTGVLYALHSFDYEQFRDLQMQVRASDSGDPPLSSNVSLSLFVLDQNDNMPEILYPMLPTDGSTGVELAPRSAEPGYLVTKVVAVDQDSGQNAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVQDHGRPPLSATVTLTVAVADSIPDVLAELGSXESPASPDDSGLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHTSHLLQASAGGLAGVPTSHFVGVDGVRAFLQTYSHEVSLTADSRRSHVIFPQPNYADTLVSQESCEKSEPLCASDDSRFPIEDTPLVPVSSIFPLL*