Sequence detailsbmy_12400 (Coding sequence)

Part of scaffold_725 (SequenceType object (1))

For more information consult the page for scaffold_725 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DIAPH1ENSBTAG00000030499 (Cow)

Gene Details

FCH and double SH3 domains protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000021194, Cow)

Protein Percentage 92.64%
cDNA percentage 92.24%
Ka/Ks Ratio 0.2163 (Ka = 0.0451, Ks = 0.2086)

Additional orthologs identified in other species via the OPTIC pipeline.

FCHSD1 (Human)   Fchsd1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2055 bp    Location:630572..619314   Strand:-
Raw sequence 
>bmy_12400
ATGCAGCCGCCGCCCCGAAAAGTGAAGCCATCCCAGGAGGTGAAGCTTCGCTTCCTGGAGCAGCTGAGCATCCTTCAGACCCGGCAGCAGAGAGAGGCGGACCTACTGGAGGATATCAGATCCTACAGCAAGCAGAGGGCAGCCATTGAACGGGAGTATGGGCAGGCACTCCAGAAACTGGCTGGGCCATTTCTGAAGAGGGAAGGACACCGGAGTGGGGAGATGGACAGCAGACTTTCTCTGGGGAGAGGCAGGATGGTGTTTGGTGCCTGGCGCTGCCTGCTGGATGCCACCATGGCTGGGGGCCAAGCCCGGCTCCAGGCATCTGACCGATACCGTGACCTGGCAGGAGGCACAGGGCGGAGCGCTAAGGAGCAGGTGCTTAGGAAGGGAGCAGAGAACCTCCAGAGGGCGCAGGCCGAGGTGCTACAGTCTGTCCGGGAGCTGAGCCGAAGTCGAAAGCTGTATGGGCAGCGTGAACGGGTGTGGGCCTTGGCACAGGAGAAGGCGGCTGATGTCCAGGCCAGGCTTAACCGAAGTGACCATGGCCTCTTCCACACTCGGACCAGTCTCCAGAAACTCAGCACCAAGCTGTCTGCCCAGTCGGCCCAGTACTCCCAGCAGCTGAGAGCGGCCCGCAATGAGTACTTGCTCAACTTGGTGGCCACCAATGCCCACCTTGACCACTACTACCAGGAAGAACTGCCGACCGCCCTGGTCAGCGAGCTGTTGGAACACCTGAGGGACCCGCTGACTTCACTGAGCCGCACTGAGCTGGAAGCTGCAGAGATGGCTCTGGAGCATGCCCACCGTGGGGGGCAGGCGACCTCCCAGGTAAGCTGGGAGCAGGATCTGGAGCTTTTTCTTCAGGAGCCCGGAGTATTTTCCCCCACCCCACCTCAGCAGTTTCAGCCAGCAGGGAATGATCAGGTGTGTGTCCTGGAGCTGGAGCAGGGCGCAGGATGTGTGGCCGGGCAGAGTGGCCTGGAGAAAGAAGTTCAACGCTGGACCAGCCGAGCTGCCCGAGACTACAAGATCCAGAACCATGGGCAGCGGCGGCTGGAGCAGAGGCGGCAGCAGGCTTCAGAGCGGGAGGCTCCAGGCATAGAACAGCGGCTGCAGGAAGTGAGGGAGAGCGTCCGGCGGGCACAGGTGAGCCAGGTGAAGGGGGCTGCCCGGCTGGCCCTGCTGCAGGGGGCTGGCCTGGATGTGCAGCACTGGCTGAAGCCAGCCATGACCCAGGCCCAGGATGAGGTGGAGCAGGAGCGACGGCTCAGCGAGGCCCGGCTGTCCCAGAGGGACCTCTCTCCCACGGCTGAGGATGCTGAGCTCTCTGACTTTGAGGAATGTGAGGAGACTGGGGAGCTCTTTGAGGAGCCCGCCCCCCCAGCCCTGGCCACCAGGCCCCTCCCCTGCCCTGTCCATGTGGTGTTTGGCTATCAGGCAGGACATGAGGACGAGCTGACCATCACAGAGGGCGAGTGGCTGGAGGTTATAGAGGAGGGAGATGCCGACGAATGGGTCAAGGCTCGGAACCAGCACGGTGAGGTAGGCTTTGTCCCTGAGCGGTATCTCAACTTCCCGGACCTCTCCTTCCCTGAGAGCAGCCATGACAGCGACAATCCTTCGGGGGCAGAGCCCACAGCGTTCCTGGCCCGCGCCCTGTACAGCTACACCGGACAGAGCGCAGAGGAACTGAGCTTCCCCGAGGGGGCGCTTATCCGCCTGCTGCCCCGGGCCCAGGATGGAGTGGATGACGGCTTCTGGAGGGGAGAATTTGGGGGCCATGTTGGGGTCTTTCCCTCCCTGCTGGTGGAGGAGCTACTTGGCCCCCCAGGGCCATCTGAACTCTCAGACCCTGAACAGGTGAGGCTTCCTTTTCCCTGGGTCCCCAGGCACGTCTGGGTTGACCCTCCCATGGCAGGGGCTTCTCCCCTCCTGCACCCACCTCTGCCTTGGATGGGTCGCCTGCACCTGTCCTGCCCGGTGATGCGTCCACCGCCGCCCCCGCCAGCTAAAGCCCCGGATCCTGGCCACCCAGATCCTCTCACCTGA

Related Sequences

bmy_12400T0 SequenceType object (3)

Length: 685 aa      
>bmy_12400T0
MQPPPRKVKPSQEVKLRFLEQLSILQTRQQREADLLEDIRSYSKQRAAIEREYGQALQKLAGPFLKREGHRSGEMDSRLSLGRGRMVFGAWRCLLDATMAGGQARLQASDRYRDLAGGTGRSAKEQVLRKGAENLQRAQAEVLQSVRELSRSRKLYGQRERVWALAQEKAADVQARLNRSDHGLFHTRTSLQKLSTKLSAQSAQYSQQLRAARNEYLLNLVATNAHLDHYYQEELPTALVSELLEHLRDPLTSLSRTELEAAEMALEHAHRGGQATSQVSWEQDLELFLQEPGVFSPTPPQQFQPAGNDQVCVLELEQGAGCVAGQSGLEKEVQRWTSRAARDYKIQNHGQRRLEQRRQQASEREAPGIEQRLQEVRESVRRAQVSQVKGAARLALLQGAGLDVQHWLKPAMTQAQDEVEQERRLSEARLSQRDLSPTAEDAELSDFEECEETGELFEEPAPPALATRPLPCPVHVVFGYQAGHEDELTITEGEWLEVIEEGDADEWVKARNQHGEVGFVPERYLNFPDLSFPESSHDSDNPSGAEPTAFLARALYSYTGQSAEELSFPEGALIRLLPRAQDGVDDGFWRGEFGGHVGVFPSLLVEELLGPPGPSELSDPEQVRLPFPWVPRHVWVDPPMAGASPLLHPPLPWMGRLHLSCPVMRPPPPPPAKAPDPGHPDPLT*