Sequence details bmy_12408 (Coding sequence)

Part of scaffold_729 (Scaffold)

For more information consult the page for scaffold_729 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

STAMBP ENSTTRG00000015478 (Bottlenosed dolphin)

Gene Details

STAM binding protein

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014666, Bottlenosed dolphin)

Protein Percentage 91.32%
cDNA percentage 93.37%
Ka/Ks Ratio 0.39637 (Ka = 0.0406, Ks = 0.1024)

STAMBP ENSBTAG00000009600 (Cow)

Gene Details

STAM-binding protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000012633, Cow)

Protein Percentage 89.12%
cDNA percentage 90.54%
Ka/Ks Ratio 0.27549 (Ka = 0.0618, Ks = 0.2242)

STAMBP  (Minke Whale)

Gene Details

STAM binding protein

External Links

Gene match (Identifier: BACU013344, Minke Whale)

Protein Percentage 93.1%
cDNA percentage 94.69%
Ka/Ks Ratio 0.842 (Ka = 0.0533, Ks = 0.0634)

Additional orthologs identified in other species via the OPTIC pipeline.

STAMBP (Human)   Stambp (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1134 bp    Location:57367..69980   Strand:+
Raw sequence 
>bmy_12408
ATGGCCTGTCAGGGTGTGCCTGTTACCCCTGCATGCCTGGAAACCCATCAGGTAGTCTCTGCAGGGCTCTTTATTGAGAAACTACCAAAGCATCGAGATTACAAATCGGCTGTCATTCCTGAAAAGAAAGACACAGTAAAGAAATTAAAGGAGATTGCATTTCCCAAAGCAGAAGAGCTGAAAGCAGAACTGTTAAAACGATATACCAAAGAATATATAGACTATAATGAAGAAAAAAAGAAGGAAGAGGAAGAATTTGCCCGAAACGTAGCCATCCAGCAAGAGATGGAAAAGGAAAGACAGAGGGTGGCACAACAGAAGCAGCAACAGTTGGAGCAGGAACAGTTCCATGCCTTTGAGGAGATGATCCGGAACCAGGAACTAGAAAAAGAACGACTGAAAATTGTACAGGAGTTTGGGAAAGTGGACCCTGGCCTGGACGGCCCACTGGTACCTGACTTAGAGAAGCCCTCCCTAGATGTGTTCCCCATGGCGCCTGTTATATACACACAGCCTTCGGACTGTAATACAACTGTAAGGCCTGCCAAGCCACCTGTAGTGGATAGATCCTTGAAACCTGGAGCATTGAGCAACTCGGAAGCTCCTACAATCGATGGACTGCGCCACGTGGTGGTGCCTGGGAAGCTCTGCCCACAGTTTCTCCAGTTGGCCATTGCCAACACTGCCCGGGGAGTAGAGACATGTGGAATTCTCTGTGGAAAACTGATGAGGAATGAGTTTACCGTTACCCACGTCCTCATCCCCAAGCAAAGTGCTGGGTCTGATTATTGCAACACTGAGAACGAAGAAGAGCTTTTCCTCATACAGGATCAGCAGGGTCTCATCACACTGGGCTGGATTCACACTCATCCCACGCAAACCGCCTTCCTCTCCAGTGTTGACCTACACACTCACTGCTCCTACCAGCTGATGTTGCCAGAGTCGATAGCCATTGTTTGTTCCCCCAAGTTCCAGGAAACTGGATTCTTTAGACTAACTGACCACGGACTAGAGGAGATTTCTTCCTGTCGCCAGAAAGGATTTCATCCACACAGCAAGGATCCACCTCTCTTCTGTAGCTGCAACCACGTGACTGTTGTGGACAGAGCAGTGACCATCACAGACCTTCGATGA

Related Sequences

bmy_12408T0 Protein

Length: 378 aa      View alignments
>bmy_12408T0
MACQGVPVTPACLETHQVVSAGLFIEKLPKHRDYKSAVIPEKKDTVKKLKEIAFPKAEELKAELLKRYTKEYIDYNEEKKKEEEEFARNVAIQQEMEKERQRVAQQKQQQLEQEQFHAFEEMIRNQELEKERLKIVQEFGKVDPGLDGPLVPDLEKPSLDVFPMAPVIYTQPSDCNTTVRPAKPPVVDRSLKPGALSNSEAPTIDGLRHVVVPGKLCPQFLQLAIANTARGVETCGILCGKLMRNEFTVTHVLIPKQSAGSDYCNTENEEELFLIQDQQGLITLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPESIAIVCSPKFQETGFFRLTDHGLEEISSCRQKGFHPHSKDPPLFCSCNHVTVVDRAVTITDLR*