Sequence detailsbmy_12415 (Coding sequence)

Part of scaffold_729 (SequenceType object (1))

For more information consult the page for scaffold_729 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MTHFD2ENSTTRG00000006716 (Bottlenosed dolphin)

Gene Details

methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000006350, Bottlenosed dolphin)

Protein Percentage 82.52%
cDNA percentage 82.85%
Ka/Ks Ratio 0.33948 (Ka = 0.0154, Ks = 0.0454)

MTHFD2ENSBTAG00000004881 (Cow)

Gene Details

Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial NAD-dependent methylenetetrahydrofolate dehydrogenase Methenyltetrahydrofolate cyclohydrolase

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000006419, Cow)

Protein Percentage 93.85%
cDNA percentage 93.2%
Ka/Ks Ratio 0.18926 (Ka = 0.0335, Ks = 0.177)

MTHFD2 (Minke Whale)

Gene Details

methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase

External Links

Gene match (Identifier: BACU013349, Minke Whale)

Protein Percentage 99.68%
cDNA percentage 99.03%
Ka/Ks Ratio 0.05385 (Ka = 0.0016, Ks = 0.0291)

Additional orthologs identified in other species via the OPTIC pipeline.

MTHFD2 (Human)   Mthfd2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 930 bp    Location:384787..407499   Strand:+
Raw sequence 
>bmy_12415
ATGGCTGCAGCGTCCCTCTTATCCGCTTTGGCCACCCGGCTGCTCCGGCCGGCGCAGAGCTGCCGCCTCCACCATCGCCCCTTCCACCTCTCGGCAGTTCGAAATGAAGCTGTTGTCATTTCGGGAAGGAAACTTGCTGAGCAGATCAAACAGGAAGTGCGGCAGGAGGTGGAAGAGTGGGTGTCATCAGGCAACAAACGGCCGCACCTGAGCGTCGTTCTGGTTGGCGAGAATCCTGCAAGTCACTCCTACGTCCTCAACAAAACCAGAGCAGCTGCCGATGTGGAGCACATTGATGAGAGAAAGATCTGCAATGCTGTTTCTCCAGACAAAGATGTTGATGGCTTTCATGTAATTAACGTAGGGCGAATGTGTTTGGACCAGAATTCCATGTTACCAGCTACTCCATGGGGTGTGTGGGAAATAATTAAGCGAACTGGTATTCCAACCCTGGGGAAGAATGTGCTTGTGGCTGGAAGGTCAAAAAACGTTGGAATGCCCATTGCAGTGCTGCTGCACACGGACGGGGCGCACGAACGCCCCGGAGGTGATGCCACTGTCACAATATCTCATCGATATACTCCCAAGGAGCAGCTGAAGAAACATACAGCTCTTGCAGATATTGTGGTCTCCGCTGCAGGCATTCCAAATCTGATCACAGCAGATATGATTAAGGAAGGAGCAGCTGTCATTGATGTGGGAATAAATAGAATTCAAGATCCCATAACTGCTAAACCCAAGTTGGTTGGAGATGTGGATTTTGAAGGAGTCAGGAAGAAAGCCGGTTACATCACTCCAGTCCCTGGGGGTGTTGGTCCCATGACAGTGGCAATGCTAATGAAGAATACCATTATTGCTGCAAAAAAAGTGCTGAGGCTTGAAGAGCGGGAAGTACTGAAGTCTAAGGAGCTTGGAGTAGCAAGTAATTAA

Related Sequences

bmy_12415T0 SequenceType object (3)

Length: 310 aa      View alignments
>bmy_12415T0
MAAASLLSALATRLLRPAQSCRLHHRPFHLSAVRNEAVVISGRKLAEQIKQEVRQEVEEWVSSGNKRPHLSVVLVGENPASHSYVLNKTRAAADVEHIDERKICNAVSPDKDVDGFHVINVGRMCLDQNSMLPATPWGVWEIIKRTGIPTLGKNVLVAGRSKNVGMPIAVLLHTDGAHERPGGDATVTISHRYTPKEQLKKHTALADIVVSAAGIPNLITADMIKEGAAVIDVGINRIQDPITAKPKLVGDVDFEGVRKKAGYITPVPGGVGPMTVAMLMKNTIIAAKKVLRLEEREVLKSKELGVASN*