Part of scaffold_729 (Scaffold)

For more information consult the page for scaffold_729 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DCTN1 ENSTTRG00000002393 (Bottlenosed dolphin)

Gene Details

dynactin 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002242, Bottlenosed dolphin)

Protein Percentage 99.27%
cDNA percentage 98.51%
Ka/Ks Ratio 0.09429 (Ka = 0.004, Ks = 0.0422)

DCTN1 ENSBTAG00000004887 (Cow)

Gene Details

dynactin subunit 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000006430, Cow)

Protein Percentage 96.5%
cDNA percentage 94.06%
Ka/Ks Ratio 0.08687 (Ka = 0.0176, Ks = 0.2026)

DCTN1  (Minke Whale)

Gene Details

dynactin 1

External Links

Gene match (Identifier: BACU013351, Minke Whale)

Protein Percentage 99.84%
cDNA percentage 99.29%
Ka/Ks Ratio 0.03607 (Ka = 0.0008, Ks = 0.022)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3687 bp    Location:569524..552406   Strand:-
>bmy_12418
ATGAGTGCGGAGGCAAGTGCCCGGCCTCTGCGAGTGGGCTCCCGCGTGGAGGTGATTGGAAAAGGCTACCGTGGCACTGTGGCCTATGTTGGAGCCACGTTATTTGCCACTGGCAAATGGGTAGGTGTGATCCTGGATGAAGCAAAAGGCAAGAATGATGGAACCGTCCAAGGCAGGAGGTACTTCACTTGTGATGAAGGGCATGGCATCTTTGTGCGCCAATCCCAGATCCAGGTATTTGAAGATGGAGCAGATACTACTTCCCCAGAGACACCTGATTCTTCTGCCTCAAAGGTCCTCAGAAGAGAGGGAACTGACTCAAATGCAAAGACCAGCAAACTGCCCACCCGCCCAGCCAGCACTGGGGTAGCTGGGACCAGTAGTTCCCTGGGCCCCTCTGGCTCAGCATCAGCAGGTGAGCTGAGCAGCAGTGAGCCCAGCACCCCAGCTCAGACTCCGCTGGCGGCACCCATCATCCCCACGCCAGCCCTCACCTCTCCTGGAGCAGCCCCACCGCTTCCTTCCCCGTCTAAGGAGGAGGAGGGGCTGAGGGCCCAAGTGCGGGACCTGGAGGAGAAACTGGAGACCCTGCGACTGAAACGTGCAGAAGACAAGGCAAAGCTAAAAGAGCTGGAGAAACACAAGATTCAGCTGGAGCAGGTGCAGGAATGGAAAAGCAAAATGCAGGAGCAGCAGGCAGACCTGCAGCGGCGCCTCAAAGAGGCTCGGAAGGAAGCCAAGGAGGCACTAGAGGCAAAGGAACGCTACATGGAGGAGATGGCTGACACTGCTGATGCCATCGAGATGGCCACTCTGGATAAGGAGATGGCTGAAGAGCGGGCTGAGTCCCTACAGCAAGAGGTGGAGGCGCTGAAGGAGCGTGTGGACGAGCTCACCACTGACTTGGAGATCCTCAAGGCTGAGATTGAAGAGAAGGGCTCAGATGGCGCTGCATCCAGTTACCAGCTCAAGCAGCTTGAGGAGCAGAACGCCCGCCTAAAGGATGCCCTAGTGAGAATGCGGGATCTTTCTTCCTCCGAAAAGCAGGAGCACGTGAAACTCCAGAAGCTCATGGAAAAGAAGAACCAAGAGCTGGAAGTTGTGAGGCAACAACGGGAGCGTCTGCAGGAGGAGCTGAGCCAGGCAGAGAGCACCATTGATGAGCTCAAGGAGCAGGTGGATGCTGCTCTGGGTGCTGAGGAGATGGTGGAGATGCTGACAGACCGGAACCTGAATCTGGAAGAGAAAGTGCGGGAATTGAGAGAAACCGTGGGGGACTTGGAAGCAATGAATGAAATGAACGATGAGCTGCAGGAGAATGCACGTGAGACAGAACTGGAGCTGCGGGAGCAGCTGGATATGGCGGGTGCACGGGTGCGAGAGGCCCAGAAGCGTGTGGAGGCGGCCCAGGAGACAGTTGCAGACTATCAGCAGACCATCAAGAAGTATCGCCAGCTGACCGCCCACCTGCAGGATGTGAACCGGGAACTGACAAACCAGCAGGAAGCATCTGTGGAGAGGCAGCAGCAGCCACCCCCAGAGACTTTTGACTTCAAAATCAAGTTTGCTGAGACTAAGGCCCATGCCAAGGCAATTGAGATGGAATTGAGGCAGATGGAGGTGGCACAGGCCAACCGGCACATGTCCCTGCTGACAGCCTTCATGCCTGACAGCTTCCTTCGGCCAGGTGGGGACCACGACTGCGTCCTGGCAGAGCTAATCCGGAAGCAGGCCCAGGAGAAGTTTGAACTAAGTGAGAACTGTTCAGAGCGGCCAGGACTTCGAGGAGCTGTGGGGGAGCAGCTCAGCTTTGCTGCTGGGCTGGTGTATTCGCTGAGTTTGCTGCAGGCCACACTCCACCGTTATGAGCATGCCCTCTCTCAGTGCAGTGTGGACGTGTATAAGAAGGTGGGCAGCCTCTACCCTGAGATGAGTGCCCACGAACGCTCCTTGGATTTTCTCATTGAGCTGCTGCACAAGGATCAGCTGGATGAGACTGTCAACGTAGAGCCTCTCACCAAAGCCATCAAGTACTACCAGCATCTGTACAGCATCCACCTCTCTGAACAACCGGAAGACAGTACCATACAGCTGGCTGACCACATTAAGTTCACCCAGAGTGCCCTGGACTGCATGAGTGTGGAGGTGGGACGGCTGCGGGCCTTCTTGCAGGGTGGGCAGGAGGCTTCAGATATTGCCCTCCTGCTCCGGGACCTGGAAACTTCGTGCAGTGATATCCGCCAGTTCTGCAAGAAGATCCGGAGGCGAATGCCAGGGACAGATGCTCCTGGGATCCCAGCTGCACTGGCCTTTGGACCACAGGTATCCGACACACTCCTAGACTGCAGGAAACACCTGACATGGGTGGTGGCTGTGCTGCAGGAGGTGGCCGCTGCTGCTGCCCAGCTCATTGCCCCGCTGGCAGAGAATGAAGGCCTGCCTGTGGCTGCCCTGGAGGAGCTGGCTTTCAAAGCAGGCGAGCAGATCTACGGGACCCCCTCCAGCAGCCCCTATGAGTGTCTGCGCCAGTCATGCAACATCTTGATCAGTACCATGAACAAGTTGGCCACAGCCATGCAGGAGGGAGAGTATGATGCAGAACGGCCCCCTAGCAAGCCTCCCCCAGTTGAGCTGCGGGCTGCAGCCCTTCGTGCAGAGATCACAGATGCTGAAGGCCTGGGCTTGAAGCTTGAAGATCGAGAGACAGTTATCAAGGAGTTGAAGAAGTCACTCAAGATCAAGGGGGAAGAGCTCAGTGAGGCCAATGTGCGGCTGAGCCTCCTGGAGAAGAAGCTGGACAGTGCAGCCAAGGATGCAGATGAGCGCATCGAGAAAGTCCAGACTCGGCTGGAGGAGACCCAGGCGCTGCTGCGGAAGAAGGAGAAAGAGTTTGAGGAGACGATGGATGCACTTCAGGCTGACATCGACCAGCTGGAAGCAGAGAAAGCAGAGTTAAAGCAGCGATTGAACAGCCAGTCCAAGCGCACGATCGAGGGGCTCCGGGGTCCCCCTCCCTCGGGTATTGCTACCCTGGTGTCTGGCATTGCTGGTGGAGGTGCCTCTGGGCAGGCTCTGGGATCTGTGCCAGGCCCAGGGCTGGTGAAGGACTCACCACTGCTGCTTCAGCAGATCTCTGCCATGAGGCTGCACATCTCCCAGCTCCAGCATGAGAACAGCATCCTCAAGGGAGCCCAGATGAAGGCATCCTTAGCAGCCCTGCCCCCTCTGCACGTGGCAAAGCTCTCTCTCCTACCCCGTGAAGGCCCTGGCAGTGATCTAGCTGCTGGAGTGCTGTATCGTAAGACTAACCAGCTGCTGGAGACATTGAATCAGTTGAGCACACACACCCATGTCGTGGACATCACCCGCACTAGCCCTGCTGCCAAGAGCCCATCGGCCCAGCTCCTAGAGCAAGTGGCTCAGCTCAAGTCCCTAAGCGACACCATCGAGAAGCTCAAGGATGAGGTCCTTAAGGAGACCGTATCTCAGCGCCCTGGAGCCACGGTCCCCACTGACTTTGCCACCTTCCCTTCATCAGCCTTCCTCAGGGCCAAGGAAGAGCAGCAGGACGACACTGTATACATGGGCAAAGTGACCTTCTCGTGTGCTGCTGGCCTTGGACAGCGACACCGGCTGGTGCTCACCCAGGAGCAGCTGCACCAGCTTCATGGTCGCCTCATCTCCTAA

Related Sequences

bmy_12418T0 Protein

Length: 1229 aa      View alignments
>bmy_12418T0
MSAEASARPLRVGSRVEVIGKGYRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRRYFTCDEGHGIFVRQSQIQVFEDGADTTSPETPDSSASKVLRREGTDSNAKTSKLPTRPASTGVAGTSSSLGPSGSASAGELSSSEPSTPAQTPLAAPIIPTPALTSPGAAPPLPSPSKEEEGLRAQVRDLEEKLETLRLKRAEDKAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADTADAIEMATLDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQNARLKDALVRMRDLSSSEKQEHVKLQKLMEKKNQELEVVRQQRERLQEELSQAESTIDELKEQVDAALGAEEMVEMLTDRNLNLEEKVRELRETVGDLEAMNEMNDELQENARETELELREQLDMAGARVREAQKRVEAAQETVADYQQTIKKYRQLTAHLQDVNRELTNQQEASVERQQQPPPETFDFKIKFAETKAHAKAIEMELRQMEVAQANRHMSLLTAFMPDSFLRPGGDHDCVLAELIRKQAQEKFELSENCSERPGLRGAVGEQLSFAAGLVYSLSLLQATLHRYEHALSQCSVDVYKKVGSLYPEMSAHERSLDFLIELLHKDQLDETVNVEPLTKAIKYYQHLYSIHLSEQPEDSTIQLADHIKFTQSALDCMSVEVGRLRAFLQGGQEASDIALLLRDLETSCSDIRQFCKKIRRRMPGTDAPGIPAALAFGPQVSDTLLDCRKHLTWVVAVLQEVAAAAAQLIAPLAENEGLPVAALEELAFKAGEQIYGTPSSSPYECLRQSCNILISTMNKLATAMQEGEYDAERPPSKPPPVELRAAALRAEITDAEGLGLKLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDSAAKDADERIEKVQTRLEETQALLRKKEKEFEETMDALQADIDQLEAEKAELKQRLNSQSKRTIEGLRGPPPSGIATLVSGIAGGGASGQALGSVPGPGLVKDSPLLLQQISAMRLHISQLQHENSILKGAQMKASLAALPPLHVAKLSLLPREGPGSDLAAGVLYRKTNQLLETLNQLSTHTHVVDITRTSPAAKSPSAQLLEQVAQLKSLSDTIEKLKDEVLKETVSQRPGATVPTDFATFPSSAFLRAKEEQQDDTVYMGKVTFSCAAGLGQRHRLVLTQEQLHQLHGRLIS*