Part of scaffold_729 (Scaffold)

For more information consult the page for scaffold_729 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

WDR54 ENSTTRG00000012715 (Bottlenosed dolphin)

Gene Details

WD repeat domain 54

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012062, Bottlenosed dolphin)

Protein Percentage 98.01%
cDNA percentage 98.41%
Ka/Ks Ratio 0.33414 (Ka = 0.0101, Ks = 0.0301)

WDR54 ENSBTAG00000000489 (Cow)

Gene Details

WD repeat-containing protein 54

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000617, Cow)

Protein Percentage 94.35%
cDNA percentage 93.82%
Ka/Ks Ratio 0.17221 (Ka = 0.0283, Ks = 0.1644)

WDR54  (Minke Whale)

Gene Details

WD repeat domain 54

External Links

Gene match (Identifier: BACU010572, Minke Whale)

Protein Percentage 93.23%
cDNA percentage 94.42%
Ka/Ks Ratio 0.537 (Ka = 0.0475, Ks = 0.0884)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 756 bp    Location:611107..614328   Strand:+
>bmy_12421
ATGTTCCGCCGGGAGCGCTCCATCCCCCTTCGAGGCTCAGCCGCCGCCCTGTGCAACAACCTCAGTGTGCTGCAGCTGCCCGTCCGCAACCTCACACATTTTGGAGTAGTCCATGGACCCAGCGCCCAGCTTCTCAGCGCCGCTCCTGAGGGTGTGCCCTTGGCCCAGCGCCAACTCCAAGCTAAGGAGGGCGCTGGAGTGAGCCCCCCACTTATCACCCAGGTCCACTGGTGTGTCCTCCCTTTCCGAGTATTGCTGGTACTCACCTCACATCGAGGAATACAAGACTGCGTGGCTGACATGGTGACAGCAGATGACTCAGGCTCGCTGTGTGTCTGGCGGTCAGGGCCCGAATTCAAATTATTGACCCGAATTCCAGGATTCGGGGTCCCGTGCCCTTCTGTGCAGCTGTGGCAGGGGACCATAGCAGCAGGCTATGGGAACGGGCAAGTGCGTCTGTATGAAGCCAGTACAGGAACTCTACATGTCCAGATCGACGCCCACGCCCGGGCCATCTGTGCCCTGGATCTGGCTCCTGAAGTGGGCAAGCTACTCTCTGCGGCTGAGGACACCTTTGTACACATCTGGAAGCTAAGCAGAAGCCCAGAGGGTGGCTACATTGAGGTGGAGCACTGTCATGGAGAGTGTGTACCCGACACCCAGGTGTGTGGTGCCCGATTCTGTGATCCCTCAGGCAGCTCCTTTGCTGTGACTGGCTATGACCTCGCTGAGATCCTGAGATTCAGCAGCATGTGA

Related Sequences

bmy_12421T0 Protein

Length: 252 aa      View alignments
>bmy_12421T0
MFRRERSIPLRGSAAALCNNLSVLQLPVRNLTHFGVVHGPSAQLLSAAPEGVPLAQRQLQAKEGAGVSPPLITQVHWCVLPFRVLLVLTSHRGIQDCVADMVTADDSGSLCVWRSGPEFKLLTRIPGFGVPCPSVQLWQGTIAAGYGNGQVRLYEASTGTLHVQIDAHARAICALDLAPEVGKLLSAAEDTFVHIWKLSRSPEGGYIEVEHCHGECVPDTQVCGARFCDPSGSSFAVTGYDLAEILRFSSM*