Part of scaffold_729 (Scaffold)

For more information consult the page for scaffold_729 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCDC142 ENSTTRG00000012720 (Bottlenosed dolphin)

Gene Details

coiled-coil domain containing 142

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012067, Bottlenosed dolphin)

Protein Percentage 95.73%
cDNA percentage 97.77%
Ka/Ks Ratio 0.78764 (Ka = 0.0208, Ks = 0.0264)

CCDC142 ENSBTAG00000016600 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022083, Cow)

Protein Percentage 87.2%
cDNA percentage 91.47%
Ka/Ks Ratio 0.51543 (Ka = 0.0727, Ks = 0.141)

CCDC142  (Minke Whale)

Gene Details

coiled-coil domain containing 142

External Links

Gene match (Identifier: BACU010577, Minke Whale)

Protein Percentage 97.41%
cDNA percentage 98.55%
Ka/Ks Ratio 0.6672 (Ka = 0.0124, Ks = 0.0186)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2295 bp    Location:658819..649368   Strand:-
>bmy_12426
ATGGCCCAAGCGTCTCGCTCTGGTGGCCTTCTGCCTCCGCTGGCTACCGTGCCGCCGTTACGGGCGCAGCCCAGGGGCGCTGAGGAGAAGCAGTGGCAGAGAAAGCGGGCAGGCGCTCTCCGCCGGGACGTTCGTGGCTGGCTGCGGCTGCCGGTTGCCCGAAGCATCCCCTGCCTGGACCCACGGCCCGGCGGAACTCCGAGAGGGCAACCGTGGTGGGCGGTGCCGGCGGACGCAGGAGAGCACCGTGAGGCTGGCGCTGTGGACTGGGGGCGGGAGCCGGCAGCTGGCGGCCCGACCCCTCCAGCGCTGCAGCGTCTCCGGGCGGTGTTGCTGCGGCTGCACCACGAGCGGCAGGAGCTCCTCCACGCCCAGGACTGCGCCCGCCACCTACAGGCGACCGTGCGCCTCCTGAGGATCCTGAGTCCCGGAGCTCCATCCCCCGGCCACTTGCCTCAGCTGTGCCGCGACCTGCTGGCGCACCCTTCCGGAGGCGCGGTCCTGCGAAGCGGCTTTCAGGAGACACCCGAGTCGCTACTCCTGGCACGCTCCGTCGGACTAGCCGCCCAGCGCCTGGATGCTACTATGGAGATGCAGCTTCGGGCTCTGGGCCAGGCGCCCGCCAGCCCAGGCCTATCATCCCAAATCGCCGACCTGCTGCTGGCACTTCCCGCCTACCACCAGCTGCAAGGAAAAGCCTTGAGCTACGTTCCAGGGGCAGCGCGCCCTTATCCCCCGGCCCGTGTGCTCCGCCTCCTGACGGGGGAGCGGGGTTGCCGGGTGGCAGGTTGGCTGGATGAGGCGCTCAGGGGATCCGACTTGAGGGACCAGCTCCGCAGGCGGTGCCAAGAGGAGCGGGAGCTGCTGCCAGGGCTACTGGGCCTGATGGGGGGCGTGACGGGTTCAGCCAGCAGTGGACTGGGGCTTGGAGGGGCTGGGGCCCTGTGGAGCCAGTACTGGACCATGCTGTGGGCAGCCTGTGCTCAGAGTCTGGACCTAAGTCTAGGACCCTGGAGGGACCCCAGGGCAGCGGCACAACAGCTGAGTCAGGCACTGGGTCAGGCATCACTGCCTCAGGAGTGTGAGAAGGAGCTGGCTTCTTTGTGTCACAACCTAATTCATCAGTCTCTTATCTGGAGCTGGGATCAAGGCTTCTGCCAGGCCTTGGGATCTGCTAGTGGAAATCAGAGCAGCCTTCCCTCATCCTCTCAAACAACTGAACTTTTGCAACAGCTCTTCCCTCCTCTCTTGGATGCCCTTCGAGAACCCAGGTCAGGACTGCTCCTCTGCCGGCCTCCAGGTCCTGCCCCCCTTTCCCTGGGGCTCTGTACCCTGCAGACCACCTTGCTCTGGTTTTGGGGCAGAACTCAGCAGCATCTGGCAGCGTGGACCCCAGGTTCCTTCCTGCTCCTGATCCAGAAGGATTTACCTCTTCTATTATATGAGGCAGAAGCTTTGTCCAGCCTGGCCTCAAAGGAAAGCTTGGCCCTGGAGGTGGAGCAGCAGCTGGGCCTGGAGATCCAGAAGCTGACTGCACAGATCCAGCTCCTGCCTGAAGAGTCACTAAGTCTCTTTTTTCAAGAATGTCATAAACAAGCCACACAGGACTTCGAACTCCACATGCCACGGGGTCGGTACTGGCRGCATCGTCTCTGTCCTGAACTTCCCAGTATCCCTAGTGAGTATGCTGGGTTGGTGGTCCGCAGGGTACTGGAGCCTGTGTTGCAAGGACTGCAAGGACTGCCACACCAAGCCCAGGCCCCTGCCCTCAGCCAGGCGCTGACTGCCATCCTGGGTGCCTGGCTTGACCACATCCTCACCCACGGGATCCGGTTCAGCCTGCAGGGGGCGCTGCAGCTCAGACAAGACTTTGGAGTGGTCAGGGAGTTGCTGGAGGAGGAGCAGTGGGGCCTGTCCCCAGAACTTCGCCAGACTCTGTTCACGCTCAGCATCTTCCAGCGGCTGGACGGGGCCCTGCTGTGTCTGTTGCAGCAGCCCCTGCCCAAGACTCAAGTCTACAGGGGGCCTCCCTGTTGCTGTGCATGTAATGAGGTCCAGACCATGGAATTGCCCAGCAGCAGCCTCAACAGCCTGGAGAGCTTGGAGCCCCCTCTTCGACCTGGAGCACTCCCAGCCCAGACAGCTCAGCTGCTAAGCACACTGTGGGGAGAAGGACCTAGCCCTGAGGCTTACCTGGTAGGAAATCAGCAGGCCTGGCTTGCCCTGAGGCAGCACCAGCATCCCCGCAGGCACTTACCTTTTCTTTCCTGCCTGAGCACCAGTTCTGAATCCTAA

Related Sequences

bmy_12426T0 Protein

Length: 765 aa      View alignments
>bmy_12426T0
MAQASRSGGLLPPLATVPPLRAQPRGAEEKQWQRKRAGALRRDVRGWLRLPVARSIPCLDPRPGGTPRGQPWWAVPADAGEHREAGAVDWGREPAAGGPTPPALQRLRAVLLRLHHERQELLHAQDCARHLQATVRLLRILSPGAPSPGHLPQLCRDLLAHPSGGAVLRSGFQETPESLLLARSVGLAAQRLDATMEMQLRALGQAPASPGLSSQIADLLLALPAYHQLQGKALSYVPGAARPYPPARVLRLLTGERGCRVAGWLDEALRGSDLRDQLRRRCQEERELLPGLLGLMGGVTGSASSGLGLGGAGALWSQYWTMLWAACAQSLDLSLGPWRDPRAAAQQLSQALGQASLPQECEKELASLCHNLIHQSLIWSWDQGFCQALGSASGNQSSLPSSSQTTELLQQLFPPLLDALREPRSGLLLCRPPGPAPLSLGLCTLQTTLLWFWGRTQQHLAAWTPGSFLLLIQKDLPLLLYEAEALSSLASKESLALEVEQQLGLEIQKLTAQIQLLPEESLSLFFQECHKQATQDFELHMPRGRYWXHRLCPELPSIPSEYAGLVVRRVLEPVLQGLQGLPHQAQAPALSQALTAILGAWLDHILTHGIRFSLQGALQLRQDFGVVRELLEEEQWGLSPELRQTLFTLSIFQRLDGALLCLLQQPLPKTQVYRGPPCCCACNEVQTMELPSSSLNSLESLEPPLRPGALPAQTAQLLSTLWGEGPSPEAYLVGNQQAWLALRQHQHPRRHLPFLSCLSTSSES*