Part of scaffold_729 (Scaffold)

For more information consult the page for scaffold_729 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

AUP1 ENSTTRG00000012726 (Bottlenosed dolphin)

Gene Details

ancient ubiquitous protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012073, Bottlenosed dolphin)

Protein Percentage 98.02%
cDNA percentage 97.69%
Ka/Ks Ratio 0.18852 (Ka = 0.0111, Ks = 0.0588)

AUP1 ENSBTAG00000020123 (Cow)

Gene Details

ancient ubiquitous protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026802, Cow)

Protein Percentage 95.39%
cDNA percentage 93.97%
Ka/Ks Ratio 0.14437 (Ka = 0.0246, Ks = 0.1701)

AUP1  (Minke Whale)

Gene Details

ancient ubiquitous protein 1

External Links

Gene match (Identifier: BACU019994, Minke Whale)

Protein Percentage 98.03%
cDNA percentage 98.03%
Ka/Ks Ratio 0.24809 (Ka = 0.0112, Ks = 0.045)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1008 bp    Location:698688..688163   Strand:-
>bmy_12431
GCGGATGCCCGAAGACTCCGCCTTCCCAAGAGCCCCTGCGGCGGGGTGCGAAGATGGCGGCGGCGGCGGTCCGGCACCCCTAAAGCGGCGGCAATGGAGCCTCCCCCGTCGCCGGGGCCGGAGCGGCTCTTTGATTCGCACCGGCTCCCGGGTGACGGCTTCCTGCTTCTCGCGCTGCTGCTCTACGCTCCAGTCGGGTTCTGCCTCCTCGTCCTGCGCGTCTTTCTTGGGATCCACGTCTTCCTGGTCAGCTGCGCGCTACCAGACAGCGTCCTTCGCAGGTTCGTGGTGCGGACCATGTGTGCAGTGCTGGGGCTCGTGGCCCGGCAGGAGGACTCCGGACTCCGAGATCACCGCGTCAGGGTCCTCATTTCCAACCACGTCACACCTTTCGACCACAACATAGTCAACCTGCTCACCAGCTGTAGCACCCCTCTACTCAATAGTCCCCCCAGCTTTGTGTGCTGGTCTCGGGGCTTCATGGAGATGGATGGGCGGGGGGAGTTGGTGGAGTCACTCAAGAGATTCTGTGCTTCAACGAGGCTTCCCCCCACCCCTCTGCTGCTATTCCCCGAGGAAGAGGCCACCAATGGCCGGGAGGGGCTCCTGCGCTTCAGTTCCTGGCCATTTTCTATCCAGGATGTGGTACAGCCTCTTACCCTGCGAGTCCAGAGACCCCTAGTTTCTGTGACGGTGTCAGATGCCTCCTGGGTCTCAGAACTGCTGTGGTCACTTTTCGTCCCTTTCACGGTGTATCAACTGGTGGCCAAAGAGTTGGGCCAGACAGGGACACAACTCACTCCAGCAGACAAAGCAGAGCACATGAAGCGACAGAGACACCCCAGATTGCGCCCCCAGTCAGCCCAGTCTTCTTTCCCTCCCTCCCCTGGCCCTTCTCCTGATGTGCAGTTGGCAACTCTGGCTCAGAGAGTGAAGGAGGTTTTACCCCATGTGCCACTGGGTGTCATCCAGAGAGACCTGGGTATGAGAAAGGGTAGACTCACGTAA

Related Sequences

bmy_12431T0 Protein

Length: 336 aa      View alignments
>bmy_12431T0
ADARRLRLPKSPCGGVRRWRRRRSGTPKAAAMEPPPSPGPERLFDSHRLPGDGFLLLALLLYAPVGFCLLVLRVFLGIHVFLVSCALPDSVLRRFVVRTMCAVLGLVARQEDSGLRDHRVRVLISNHVTPFDHNIVNLLTSCSTPLLNSPPSFVCWSRGFMEMDGRGELVESLKRFCASTRLPPTPLLLFPEEEATNGREGLLRFSSWPFSIQDVVQPLTLRVQRPLVSVTVSDASWVSELLWSLFVPFTVYQLVAKELGQTGTQLTPADKAEHMKRQRHPRLRPQSAQSSFPPSPGPSPDVQLATLAQRVKEVLPHVPLGVIQRDLGMRKGRLT*