Part of scaffold_729 (Scaffold)

For more information consult the page for scaffold_729 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HTRA2 ENSTTRG00000012727 (Bottlenosed dolphin)

Gene Details

HtrA serine peptidase 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012074, Bottlenosed dolphin)

Protein Percentage 88.12%
cDNA percentage 88.64%
Ka/Ks Ratio 0.41596 (Ka = 0.0112, Ks = 0.0269)

HTRA2 ENSBTAG00000020124 (Cow)

Gene Details

Serine protease HTRA2, mitochondrial

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026804, Cow)

Protein Percentage 95.53%
cDNA percentage 94.78%
Ka/Ks Ratio 0.19253 (Ka = 0.0242, Ks = 0.1255)

HTRA2  (Minke Whale)

Gene Details

HtrA serine peptidase 2

External Links

Gene match (Identifier: BACU019995, Minke Whale)

Protein Percentage 99.33%
cDNA percentage 99.18%
Ka/Ks Ratio 0.18636 (Ka = 0.0034, Ks = 0.0184)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1344 bp    Location:698971..702972   Strand:+
>bmy_12432
ATGGCTGCACTGAGGGCGGGGCGGGGTGCAGTCTGGAGCCTCCGGGGATGGCGGGCTTTGGGGGGGGGTCGCTGGGGAAAGGGACCCCTGTTGACCCCTGACCTCCGGGCCTTGCTGACGTCAGGAACTCCTGACCCTCGGGCCCGAGTGACTTATGGGACCCCCAGTTTCGGGGCCCGGTTGTCTGTGGGAGTCCCTGAACCACGAACATGTCTGACGTCGGGGACTTCGGATCCCCGAGCACGGCTGATCGAGGGGACCCCAGATCCCCGGATCCGGGAAGACTCAGGGACCCCTGGAACCCGCCCGCGCGTGTGGCTGGCGGTGGCGCTGGGCGCTGGGGGGGCAGTGCTCTTGTTGTTGTGGGGCGGGGGTCGGGGTCCCCCGGCCGTCCTCGCCTCGGTCTCTGGCTCGCCGCCTCCCTCTCCCCGGAGCCAGTACAACTTCATCGCGGACGTGGTGGAGAAGACGGCCCCTGCCGTGGTTTATATCGAGATCTTGGGCCGGCACCCTTTTTCGGGCCGCGAAGTCCCTATCTCGAATGGCTCAGGATTCGTGGTGGCTGCCGACGGGCTCATCGTTACCAACGCTCATGTGGTGGCTGATCGGCGCCGAGTCCGTGTGAGGCTGCCTAGCGGCGATACGTATGAGGCCGTGGTCACAGCTGTGGATCCCGTGGCAGATATCGCCACGCTGAGGATTCAGACCAAGGAGCCTCTCCCCACGCTGCCCCTGGGACGTTCAGCCGATGTCCGGCAAGGGGAGTTTGTTGTTGCCATGGGAAGTCCCTTTGCACTGCAGAACACGATCACATCCGGCATTGTCAGCTCTGCTCAGCGTCCAGCCAGAGACCTGGGCCTTCCCCAAACCAATGTGGAATACATCCAGACTGATGCAGCTATTGATGATGGGGAGGTGATTGGGGTGAATACCATGAAGGTCACAGCTGGAATCTCCTTTGCCATCCCTGCTGATCGCCTTCGAGAGTTTCTGCATCGTGGAGAAAAGAAGAATTCCTGGTTTGGAACCAGTGGGTCCCAGCGCCGCTACATTGGAGTGATGATGCTAACCCTGACTCCCAGCATCCTTGCTGAACTACAGCTTCGAGAACCAAGCTTTCCTGATGTTCAGCATGGTGTGCTCATCCATAAAGTCATCCTGGACTCCCCTGCACACCGGGCTGGTCTACGGCCTGGTGATGTGATCTTGGCCATTGGGGAGCGGCTGGTACAAAATGCTGAAGATATTTATGAAGCCGTTCGAACCCAATCCCAGCTGGCAGTGCGGATCCGGCGGGGACCGGAAACATTGACCTTATATGTGACCCCTGAAGTCACAGAATGA

Related Sequences

bmy_12432T0 Protein

Length: 448 aa      View alignments
>bmy_12432T0
MAALRAGRGAVWSLRGWRALGGGRWGKGPLLTPDLRALLTSGTPDPRARVTYGTPSFGARLSVGVPEPRTCLTSGTSDPRARLIEGTPDPRIREDSGTPGTRPRVWLAVALGAGGAVLLLLWGGGRGPPAVLASVSGSPPPSPRSQYNFIADVVEKTAPAVVYIEILGRHPFSGREVPISNGSGFVVAADGLIVTNAHVVADRRRVRVRLPSGDTYEAVVTAVDPVADIATLRIQTKEPLPTLPLGRSADVRQGEFVVAMGSPFALQNTITSGIVSSAQRPARDLGLPQTNVEYIQTDAAIDDGEVIGVNTMKVTAGISFAIPADRLREFLHRGEKKNSWFGTSGSQRRYIGVMMLTLTPSILAELQLREPSFPDVQHGVLIHKVILDSPAHRAGLRPGDVILAIGERLVQNAEDIYEAVRTQSQLAVRIRRGPETLTLYVTPEVTE*