Sequence details bmy_12481 (Coding sequence)

Part of scaffold_763 (Scaffold)

For more information consult the page for scaffold_763 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

U2SURP ENSTTRG00000017170 (Bottlenosed dolphin)

Gene Details

U2 snRNP-associated SURP domain containing

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016274, Bottlenosed dolphin)

Protein Percentage 95.01%
cDNA percentage 95.72%
Ka/Ks Ratio 0.40811 (Ka = 0.0356, Ks = 0.0871)

U2SURP ENSBTAG00000009154 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000012063, Cow)

Protein Percentage 95.22%
cDNA percentage 94.4%
Ka/Ks Ratio 0.17896 (Ka = 0.0331, Ks = 0.1849)

U2SURP  (Minke Whale)

Gene Details

U2 snRNP-associated SURP domain containing

External Links

Gene match (Identifier: BACU012773, Minke Whale)

Protein Percentage 92.11%
cDNA percentage 93.51%
Ka/Ks Ratio 0.4478 (Ka = 0.0568, Ks = 0.1268)

Additional orthologs identified in other species via the OPTIC pipeline.

U2SURP (Human)   U2surp (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3192 bp    Location:73835..124716   Strand:+
Raw sequence 
>bmy_12481
ATGACCAACACCGGAAGTCACGTGGGGAAGCTCCTCTTGAATTTCGCCAAGTCGGCAGTCGACTATTCGGTCTTGCACGCGCCTCAGGCGGGCTCCGCTGAGATCCAGTCTTTCGGCGCTCGACTCGCCCGTGCTGCTGCCGCTGCCGAAGGAGGGGCAAAGCTCAAGATGGCGGACAAAACGCCAGGCGGCTCTCAGAAGGCCAGTTCAAAGACCAGATCATCAGATGTTCATTCATCTGGATCTTCAGATGCCCACATGGATGCATCTGGACCCTCAGATAGTGATATGCCAAGTCGGACACGACCTAAGAGCCCAAGAAAACATAATTATAGGAATGAAAGTGCCCGTGAAAACGTTTGTGACTCTCCTCATCAGAATCTCTCAAGACCTCTTCTAGAAAACAAACTTAAAGCATTCAGTATTGGAAAAATGAGTACAGCTAAGCGAACTTTAAGTAAGAAGGAGCAAGAAGAATTAAAGAAGAAGGAGGATGAAAAGGCAGCTGCTGAAATTTATGAGGAATTTCTTGCTGCCTTTGAAGGAAGTGATGGTAATAAAGTGAAAACGTTTGTGCGCGGAGGTGTTGTTAATGCAGCTAAAGAAGAACATGAAACAGATGAAAAAAGAGGTAAAATCTATAAGCCATCCTCAAGATTTGCAGATCAAAAAAATCCTCCAAATCAGTCATCCAATGAAAGACCACCATCTCTTCTTGTGATAGAAACCAAAAAACCTCCACTGAAGAAAGGCGAGAAAGAAAAGAAAAAAAGCAATTTGGAACTCTTCAAAGAAGAATTGAAACAAATTCAAGAAGAGCGTGATGAGAGACATAAAACAAAAGGCAGGTTAAGTCGATTTGAGCCGCCTCAGTCAGATTCTGATGGTCAGCGTCGTTCTATGGATGCGCCTTCAAGAAGAAATAGATCATCTGGTGTTCTCGATGATTATGCACCTGGCTCACATGATGTAGGAGATCCAAGCACTACTAATTTATACCTTGGAAACATTAATCCACAGATGAATGAAGAAATGTTGTGCCAGGAGTTTGGAAGATTTGGGCCCCTGGCCAGCGTGAAAATTATGTGGCCCAGAACTGATGAAGAAAGGGCAAGAGAGAGAAATTGTGGCTTTGTGGCCTTTATGAATAGAAGAGATGCTGAAAGAGCTTTAAAAAACTTAAATGGAAAGATGATTATGTCTTTTGAAATGAAGTTAGGTTGGGGTAAAGCTGTGCCTATTCCTCCACATCCAATATACATTCCGCCTTCCATGATGGAACATACGCTTCCCCCACCTCCGTCAGGACTGCCTTTTAATGCGCAGCCTAGAGAGCGGTTAAAAAACCCCAATGCTCCCATGTTACCACCACCTAAAAACAAGGAGGATTTTGAGAAGGTGTTTGGAATTCTTTTATTTTCCTTTCTTCCGTTTTTTCTTTTTCAACATAATGTTAAAGCAGAAGAAAGAATTCATGCCGTAGATATATCAGTTACAAGCCTGTTTAAAACTGTAGTGGGTTTTTTTTTTCCCCTGGAATTTGCTCGCCCTAATACATCGAATGATAGAGTTTGTTGTACATTCTTATTTGAAAACCAGACACCAGCCCATGTTTACTATAGGTGGAAGCTTTATTCTATTCTGCAGGCAAGTATAATCAACTACTTTGTTAATTTTGACTCTGAGGGAGATTCTCCAACTAAGTGGCGGACAGAAGATTTTCGTATGTTCAAAAATGGATCTTTTTGGAGGCCACCACCGTTAAATCCATATCTGCATGGGATGTCAGAAGAGCAGGAAACAGAAGCTTTTGTAGAGGAGCCTAGTAAAAAGGGAGCACTTAAGGAAGAACAGAGGGACAAATTAGAAGAAATTCTGCGGGGGTTAACTCCAAGGAAAAATGATATTGGAGATGCAATGGTTTTCTGTCTTAATAATGCTGAAGCTGCTGAAGAAATAGTGGATTGCATTACCGAGTCATTGTCCATCTTAAAGACACCCCTTCCCAAAAAGATTGCCAGATTATATTTGGTTTCTGATGTTTTGTACAACTCTTCAGCTAAAGTTGCCAATGCTTCCTATTATAGAAAATTTTTTGAAACAAAGTTGTGTCAGATATTTTCAGACCTCAATGCTACCTATCGTACAATTCAAGGCCATTTACAGTCTGAAAACTTTAAGCAACGGGTAATGACCTGCTTTAGAGCATGGGAAGATTGGGCAATTTATCCAGAACCATTTTTGATCAAACTACAAAATATTTTCTTAGGACTTGTAAATATTATTGAAGAAAAGGAGACAGAGGATGTACCAGATGACCTTGATGGTGCCCCCATTGAGGAAGAGCTTGATGGTGCACCTCTAGAAGATGTGGATGGAATTCCTATTGATGCTACTCCCATTGATGACCTTGATGGAGTCCCTATTAAGAGCCTTGATGATGATCTTGATGGAGTGCCTTCTGTAACAACTTCTAAATGGGAGTTATTTGACCAGCATGAAGAATCAGAAGAAGAAGAAAATCAAAATCAAGAAGAAGAAAGTGAAGATGAAGAAGATACTCAAAGTTCCAAATCTGAAGAACATCATTTGTACTCTAATCCAATCAAAGAAGAAATGACTGAGTCCAAGTTCTCTAAGTACTCTGAAATGATTATGAAGTTTCAAGATGAATTGGAATCTGGAAAAAGACCTAAAAAACCAGGCCAGAGCTTTCAGGAACAAGTAGAACACTACAGAGATAAACTTCTTCAACGAGAGAAAGAGAAAGAATTAGAAAGAGAACGAGAAAGAGATAAGAAGGATAAAGAAAAATTGGAATCTCGATCCAAAGACAAGAAGGAAAAAGATGAGTGTACTCCAACAAGGAAAGAAAGGAAAAGGCGACACAGTACGTCCCCTAGCCCATCTCGCAGTAGCAGTGGTAGACGAGTGAAATCCCCATCACCAAAATCGGAGCGATCAGAGCGTTCAGAAAGATCTCATAAAGAGAGCTCACGGTCCAGGTCATCTCACAAAGATTCTCCTAGAGATGTTAGCAAAAAGGCCAAAAGATCTCCATCTGGTTCAAGGACACCTAAAAGGTCTAGGCGATCACGGTCTAGATCCCCTAAAAAATCAGGGAAGAAATCCAGATCCCAGTCCCGATCTCCACACAGGTCTCATAAAAAGTCAAAGAAAAACAAACACTGA

Related Sequences

bmy_12481T0 Protein

Length: 1064 aa      View alignments
>bmy_12481T0
MTNTGSHVGKLLLNFAKSAVDYSVLHAPQAGSAEIQSFGARLARAAAAAEGGAKLKMADKTPGGSQKASSKTRSSDVHSSGSSDAHMDASGPSDSDMPSRTRPKSPRKHNYRNESARENVCDSPHQNLSRPLLENKLKAFSIGKMSTAKRTLSKKEQEELKKKEDEKAAAEIYEEFLAAFEGSDGNKVKTFVRGGVVNAAKEEHETDEKRGKIYKPSSRFADQKNPPNQSSNERPPSLLVIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSDGQRRSMDAPSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKEDFEKVFGILLFSFLPFFLFQHNVKAEERIHAVDISVTSLFKTVVGFFFPLEFARPNTSNDRVCCTFLFENQTPAHVYYRWKLYSILQASIINYFVNFDSEGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEEPSKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAPLEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPSVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPIKEEMTESKFSKYSEMIMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERERDKKDKEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSPSPKSERSERSERSHKESSRSRSSHKDSPRDVSKKAKRSPSGSRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRSHKKSKKNKH*