Sequence details bmy_12504 (Coding sequence)

Part of scaffold_734 (Scaffold)

For more information consult the page for scaffold_734 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PRDM10 ENSTTRG00000009189 (Bottlenosed dolphin)

Gene Details

PR domain containing 10

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008715, Bottlenosed dolphin)

Protein Percentage 98.74%
cDNA percentage 97.68%
Ka/Ks Ratio 0.0956 (Ka = 0.0069, Ks = 0.0721)

PRDM10 ENSBTAG00000019001 (Cow)

Gene Details

PR domain zinc finger protein 10

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025295, Cow)

Protein Percentage 96.41%
cDNA percentage 92.34%
Ka/Ks Ratio 0.05237 (Ka = 0.017, Ks = 0.324)

PRDM10  (Minke Whale)

Gene Details

PR domain containing 10

External Links

Gene match (Identifier: BACU010166, Minke Whale)

Protein Percentage 99.01%
cDNA percentage 98.62%
Ka/Ks Ratio 0.1423 (Ka = 0.0051, Ks = 0.0362)

Additional orthologs identified in other species via the OPTIC pipeline.

PRDM10 (Human)   Prdm10 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3345 bp    Location:752420..805435   Strand:+
Raw sequence 
>bmy_12504
ATGGATTCCAAAGATGAAAGCTCACACGTGTGGCCTCCGGCTGCAGAGCATGAGGAGAATGCCGCACAGGTGCATTTTGTTCCAGACGCTGGAACTGTGGCCCAGATTGTCTACACCGATGACCAGACGCTGTTTACAGACCCAGGCCAGGTAGCTTATGTCCAACAGGATGCTACAGCTCAGCAGGCCTCGTTGCCGGTGCACAACCAGGTGTTGCCTTCCATTGAGGGCGTGGATGGCTCGGACCCTTTGGCGACCCTGCAGAACCCCATGGCCAGGCTGGAGGCCAAGGAGGAGGAGGACGAGGAGGAGGAGGAGGATTCTGAGGAGGAGGACGAGGAAGACGGCGAAGACACAGACCTGGACGACTGGGAGCCTGACCCCCCTCGGCCCTTCGACCCACACGACTTGTGGTGCGAGGAGTGTAATAACGCACACTCTTCCGTGTGCCCGAAGCATGGCCCCCTGCATCCGATCCCCAACCGGCCGGTGCTGACTCGGGCGCGGGCCAGCCTCCCCCTGGTGCTGTACATCGACAGGTTCCTGGGCGGTGTGTTCTCCAAAAGGCGTATCCCCAAGCGCACCCAGTTTGGCCCTGTGGAGGGGCCGCTGGTCAGGGAGTCGGAGCTGAAGGACTGTTACATCCACCTCAAGGTTTCTCTGGATAAAGGTGACAGAAAAGACAGGGATTTGCATGAAGACCTGTGGTTTGAGTTGTCTGACGAGACCCTCTGTAACTGGATGATGTTTGTACGCCCGGCCCAGAACCACCTGGAGCAGAACCTGGTGGCTTATCAGTACGGCCACCACGTGTACTACACAACGATCAAGAACGTGGAACCCAAGCAAGAGCTTAAGGTGTGGTATGCTGCTTCCTATGCCGAGTTTGTGAACCGGAAGATTCATGACATTTCCGAGGAAGAAAGGAAAGTTCTTCGAGAGCAAGAGAAGAATTGGCCCTGCTACGAATGTAACCGCCGATTTATAAGCTCAGAGCAGCTGCAACAGCATCTCAACTCGCATGATGAGAAACTGGATGTGTTTAGCAGAACAAGAGGCAGAGGAAGGGGGCGAGGCAAGAGGCGGTTTGGCCCGGGTCGACGGCCGGGACGCCCTCCCAAATTTATCCGCTTGGAAATAACCAGTGAAAATGGGGAAAAGTGTGATGATGGGACACAGGACTTGCTGTACTTTCCCACCAAGGAGCAGTTCGATGAGGCTGAACCTGCAACTCTGAATGGCCTGGACCAACCGGAGCAGCCCGCGCTCGCAGTCCCTCAGCTGCCACCGGAAGCCCAGTCTTCTCTGGAGCACGAGACGGAAACGCACGAGCTGCACCTGCAGCCCCAGCACGAGGAGAGCGTGCTGCCCGCGCAGAGCACCCTGACGGCCGACGACATGCGCAGGGCCAAGCGCATCCGGAATGCAGCTCTTCAGCATCTGTTTATTCGGAAGTCCTTCCGGCCTTTTAAATGTTTGCAGTGTGGGAAGGCCTTCCGTGAAAAGGACAAACTGGACCAACACTTGCGCTTCCATGGGCGGGAGGGGAGCTGCCCGTTGACCTGTGACCTCTGTAACAAGGGCTTCATCAGCAGTGCGTCCTTGGAGAGCCACATGAAGCTCCACTCGGACCAGAAGACTTACTCTTGCATTTTTTGCCCAGAATCCTTTGACCGCCTTGATTTGTTGAAAGATCACGTGGCCATTCATATCAGTGATGGCTACTTCACCTGCCCAACTTGTAAGAAACGGTTCCCAGATTTTATCCAGGTGAAAAAACACGTGCGAAGCTTCCACTCGGAAAAGATCTACCAGTGTACGGAGTGCGACAAGGCCTTCTGCCGCCCTGACAAGCTGCGGCTGCATATGCTCCGGCACTCAGACCGTAAGGACTTCCTGTGTTCTACGTGTGGGAAGCAGTTTAAGCGAAAAGACAAACTACGGGAACACATGCAGAGGATGCACAACCCTGAAAGGGAGGCCAGGAAAGCCGACCGCATCAGCCGCTCCAAGACGTTCAAGCCGCGCATCACGTCCACCGACTACGACAGCTTCACGTTCAAGTGCCGCCTGTGCATGATGGGCTTCCGGAGACGAGGCATGCTGGTAAATCACTTATCAAAGAGGCACCCAGACATGAAGATAGAAGAGGTGCCAGAGTTAACTCTACCCATCATAAAGCCCAACCGTGACTACTTTTGTCAGTATTGTGATAAGGTTTATAAAAGTGCCAGCAAGCGAAAAGCCCATATTCTGAAGAACCATCCTGGGGCTGAGCTCCCACCAAGCATTCGGAAACTTCGTCCTGCTGGCCCTGGAGAACCAGACCCCATGCTGAGCACCCACACCCAGCTCACAGGCACTATAGCTACCCCGCCCGTGTGCTGCCCTCACTGCTCCAAACAGTACAGCAGCAAGACCAAGATGGTACAACACATTCGAAAGAAGCATCCAGAGTACGCCCAGCTCCCCAACACCATACACGCACCTCTGACAACAGCCGTGATCAGCGCGGCTCCAGCTGTTTTAACTACAGACAGTGCTACCGGAGAGACTGTGGTGACAACAGACTTGCTAACCCAGGCTATGACGGAACTGTCCCAGACCTTAACGACGGATTACCGAACGCCGCAAGGGGACTACCAGAGAATCCAGTACATTCCTGTGTCGCAGTCTACATCTGGTCTACAGCAGCCTCAGCACATACAGCTTCAAGTGGTGCAGGTGGCCCCGGCCACTTCCCCTCACCAGTCCCAGCAGTCCACGGTGGACGTCGCCCAGCTCCACGACCCTCAGACCTACACGCAGCATGCCATCCAGGTGCAACACATCCAGGTCACGGAGCCCCCCACCCCGGCCGCGCCTGCCTCCCAGGTGGCAGGGCAGCCGCTGAGCCCCTCCCCGCAGCAGTCTCAGCAGGGGCTCAGCCCCTCCCAGGTTGCAGGCAGCTCCTCGCAGGGCCAGGCCCTCCAGCAGCAGCCCCAGAGCACCACGGTCCAGCACACGTACCTCCCCAATGCCTGGAATTCYTTCCGCGGCTACTCATCGGAGATTCAGATGATGACGCTCCCCCCGGGTCAGTTTGTGATTACAGACAGTGGCGTGGCAACTCCGGTCACCACTGGCCAAGTGAAGGCGGTGACTCCAGGTCATTATGTGCTATCAGAAAGTCAATCAGAATTGGAGGAAAAGCAAGCTTCTGCTCTCACTGGTGGAGTCCAGGTTCAGCCAACTGCGCATGGTGACTTGGACCCCCAGACCACCAGCCAACAGCCCACCCAGTACATCATTACAACCACCACCAACGGGAATGGGAGCAGCGAAGTGCACATCACTAAACCTTAA

Related Sequences

bmy_12504T0 Protein

Length: 1115 aa      View alignments
>bmy_12504T0
MDSKDESSHVWPPAAEHEENAAQVHFVPDAGTVAQIVYTDDQTLFTDPGQVAYVQQDATAQQASLPVHNQVLPSIEGVDGSDPLATLQNPMARLEAKEEEDEEEEEDSEEEDEEDGEDTDLDDWEPDPPRPFDPHDLWCEECNNAHSSVCPKHGPLHPIPNRPVLTRARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVRESELKDCYIHLKVSLDKGDRKDRDLHEDLWFELSDETLCNWMMFVRPAQNHLEQNLVAYQYGHHVYYTTIKNVEPKQELKVWYAASYAEFVNRKIHDISEEERKVLREQEKNWPCYECNRRFISSEQLQQHLNSHDEKLDVFSRTRGRGRGRGKRRFGPGRRPGRPPKFIRLEITSENGEKCDDGTQDLLYFPTKEQFDEAEPATLNGLDQPEQPALAVPQLPPEAQSSLEHETETHELHLQPQHEESVLPAQSTLTADDMRRAKRIRNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQHLRFHGREGSCPLTCDLCNKGFISSASLESHMKLHSDQKTYSCIFCPESFDRLDLLKDHVAIHISDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPEREARKADRISRSKTFKPRITSTDYDSFTFKCRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKTKMVQHIRKKHPEYAQLPNTIHAPLTTAVISAAPAVLTTDSATGETVVTTDLLTQAMTELSQTLTTDYRTPQGDYQRIQYIPVSQSTSGLQQPQHIQLQVVQVAPATSPHQSQQSTVDVAQLHDPQTYTQHAIQVQHIQVTEPPTPAAPASQVAGQPLSPSPQQSQQGLSPSQVAGSSSQGQALQQQPQSTTVQHTYLPNAWNSFRGYSSEIQMMTLPPGQFVITDSGVATPVTTGQVKAVTPGHYVLSESQSELEEKQASALTGGVQVQPTAHGDLDPQTTSQQPTQYIITTTTNGNGSSEVHITKP*