Sequence detailsbmy_12504 (Coding sequence)

Part of scaffold_734 (SequenceType object (1))

For more information consult the page for scaffold_734 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PRDM10ENSTTRG00000009189 (Bottlenosed dolphin)

Gene Details

PR domain containing 10

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008715, Bottlenosed dolphin)

Protein Percentage 98.74%
cDNA percentage 97.68%
Ka/Ks Ratio 0.0956 (Ka = 0.0069, Ks = 0.0721)

PRDM10ENSBTAG00000019001 (Cow)

Gene Details

PR domain zinc finger protein 10

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000025295, Cow)

Protein Percentage 96.41%
cDNA percentage 92.34%
Ka/Ks Ratio 0.05237 (Ka = 0.017, Ks = 0.324)

PRDM10 (Minke Whale)

Gene Details

PR domain containing 10

External Links

Gene match (Identifier: BACU010166, Minke Whale)

Protein Percentage 99.01%
cDNA percentage 98.62%
Ka/Ks Ratio 0.1423 (Ka = 0.0051, Ks = 0.0362)

Additional orthologs identified in other species via the OPTIC pipeline.

PRDM10 (Human)   Prdm10 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3345 bp    Location:752420..805435   Strand:+
Raw sequence 
>bmy_12504
ATGGATTCCAAAGATGAAAGCTCACACGTGTGGCCTCCGGCTGCAGAGCATGAGGAGAATGCCGCACAGGTGCATTTTGTTCCAGACGCTGGAACTGTGGCCCAGATTGTCTACACCGATGACCAGACGCTGTTTACAGACCCAGGCCAGGTAGCTTATGTCCAACAGGATGCTACAGCTCAGCAGGCCTCGTTGCCGGTGCACAACCAGGTGTTGCCTTCCATTGAGGGCGTGGATGGCTCGGACCCTTTGGCGACCCTGCAGAACCCCATGGCCAGGCTGGAGGCCAAGGAGGAGGAGGACGAGGAGGAGGAGGAGGATTCTGAGGAGGAGGACGAGGAAGACGGCGAAGACACAGACCTGGACGACTGGGAGCCTGACCCCCCTCGGCCCTTCGACCCACACGACTTGTGGTGCGAGGAGTGTAATAACGCACACTCTTCCGTGTGCCCGAAGCATGGCCCCCTGCATCCGATCCCCAACCGGCCGGTGCTGACTCGGGCGCGGGCCAGCCTCCCCCTGGTGCTGTACATCGACAGGTTCCTGGGCGGTGTGTTCTCCAAAAGGCGTATCCCCAAGCGCACCCAGTTTGGCCCTGTGGAGGGGCCGCTGGTCAGGGAGTCGGAGCTGAAGGACTGTTACATCCACCTCAAGGTTTCTCTGGATAAAGGTGACAGAAAAGACAGGGATTTGCATGAAGACCTGTGGTTTGAGTTGTCTGACGAGACCCTCTGTAACTGGATGATGTTTGTACGCCCGGCCCAGAACCACCTGGAGCAGAACCTGGTGGCTTATCAGTACGGCCACCACGTGTACTACACAACGATCAAGAACGTGGAACCCAAGCAAGAGCTTAAGGTGTGGTATGCTGCTTCCTATGCCGAGTTTGTGAACCGGAAGATTCATGACATTTCCGAGGAAGAAAGGAAAGTTCTTCGAGAGCAAGAGAAGAATTGGCCCTGCTACGAATGTAACCGCCGATTTATAAGCTCAGAGCAGCTGCAACAGCATCTCAACTCGCATGATGAGAAACTGGATGTGTTTAGCAGAACAAGAGGCAGAGGAAGGGGGCGAGGCAAGAGGCGGTTTGGCCCGGGTCGACGGCCGGGACGCCCTCCCAAATTTATCCGCTTGGAAATAACCAGTGAAAATGGGGAAAAGTGTGATGATGGGACACAGGACTTGCTGTACTTTCCCACCAAGGAGCAGTTCGATGAGGCTGAACCTGCAACTCTGAATGGCCTGGACCAACCGGAGCAGCCCGCGCTCGCAGTCCCTCAGCTGCCACCGGAAGCCCAGTCTTCTCTGGAGCACGAGACGGAAACGCACGAGCTGCACCTGCAGCCCCAGCACGAGGAGAGCGTGCTGCCCGCGCAGAGCACCCTGACGGCCGACGACATGCGCAGGGCCAAGCGCATCCGGAATGCAGCTCTTCAGCATCTGTTTATTCGGAAGTCCTTCCGGCCTTTTAAATGTTTGCAGTGTGGGAAGGCCTTCCGTGAAAAGGACAAACTGGACCAACACTTGCGCTTCCATGGGCGGGAGGGGAGCTGCCCGTTGACCTGTGACCTCTGTAACAAGGGCTTCATCAGCAGTGCGTCCTTGGAGAGCCACATGAAGCTCCACTCGGACCAGAAGACTTACTCTTGCATTTTTTGCCCAGAATCCTTTGACCGCCTTGATTTGTTGAAAGATCACGTGGCCATTCATATCAGTGATGGCTACTTCACCTGCCCAACTTGTAAGAAACGGTTCCCAGATTTTATCCAGGTGAAAAAACACGTGCGAAGCTTCCACTCGGAAAAGATCTACCAGTGTACGGAGTGCGACAAGGCCTTCTGCCGCCCTGACAAGCTGCGGCTGCATATGCTCCGGCACTCAGACCGTAAGGACTTCCTGTGTTCTACGTGTGGGAAGCAGTTTAAGCGAAAAGACAAACTACGGGAACACATGCAGAGGATGCACAACCCTGAAAGGGAGGCCAGGAAAGCCGACCGCATCAGCCGCTCCAAGACGTTCAAGCCGCGCATCACGTCCACCGACTACGACAGCTTCACGTTCAAGTGCCGCCTGTGCATGATGGGCTTCCGGAGACGAGGCATGCTGGTAAATCACTTATCAAAGAGGCACCCAGACATGAAGATAGAAGAGGTGCCAGAGTTAACTCTACCCATCATAAAGCCCAACCGTGACTACTTTTGTCAGTATTGTGATAAGGTTTATAAAAGTGCCAGCAAGCGAAAAGCCCATATTCTGAAGAACCATCCTGGGGCTGAGCTCCCACCAAGCATTCGGAAACTTCGTCCTGCTGGCCCTGGAGAACCAGACCCCATGCTGAGCACCCACACCCAGCTCACAGGCACTATAGCTACCCCGCCCGTGTGCTGCCCTCACTGCTCCAAACAGTACAGCAGCAAGACCAAGATGGTACAACACATTCGAAAGAAGCATCCAGAGTACGCCCAGCTCCCCAACACCATACACGCACCTCTGACAACAGCCGTGATCAGCGCGGCTCCAGCTGTTTTAACTACAGACAGTGCTACCGGAGAGACTGTGGTGACAACAGACTTGCTAACCCAGGCTATGACGGAACTGTCCCAGACCTTAACGACGGATTACCGAACGCCGCAAGGGGACTACCAGAGAATCCAGTACATTCCTGTGTCGCAGTCTACATCTGGTCTACAGCAGCCTCAGCACATACAGCTTCAAGTGGTGCAGGTGGCCCCGGCCACTTCCCCTCACCAGTCCCAGCAGTCCACGGTGGACGTCGCCCAGCTCCACGACCCTCAGACCTACACGCAGCATGCCATCCAGGTGCAACACATCCAGGTCACGGAGCCCCCCACCCCGGCCGCGCCTGCCTCCCAGGTGGCAGGGCAGCCGCTGAGCCCCTCCCCGCAGCAGTCTCAGCAGGGGCTCAGCCCCTCCCAGGTTGCAGGCAGCTCCTCGCAGGGCCAGGCCCTCCAGCAGCAGCCCCAGAGCACCACGGTCCAGCACACGTACCTCCCCAATGCCTGGAATTCYTTCCGCGGCTACTCATCGGAGATTCAGATGATGACGCTCCCCCCGGGTCAGTTTGTGATTACAGACAGTGGCGTGGCAACTCCGGTCACCACTGGCCAAGTGAAGGCGGTGACTCCAGGTCATTATGTGCTATCAGAAAGTCAATCAGAATTGGAGGAAAAGCAAGCTTCTGCTCTCACTGGTGGAGTCCAGGTTCAGCCAACTGCGCATGGTGACTTGGACCCCCAGACCACCAGCCAACAGCCCACCCAGTACATCATTACAACCACCACCAACGGGAATGGGAGCAGCGAAGTGCACATCACTAAACCTTAA

Related Sequences

bmy_12504T0 SequenceType object (3)

Length: 1115 aa      View alignments
>bmy_12504T0
MDSKDESSHVWPPAAEHEENAAQVHFVPDAGTVAQIVYTDDQTLFTDPGQVAYVQQDATAQQASLPVHNQVLPSIEGVDGSDPLATLQNPMARLEAKEEEDEEEEEDSEEEDEEDGEDTDLDDWEPDPPRPFDPHDLWCEECNNAHSSVCPKHGPLHPIPNRPVLTRARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVRESELKDCYIHLKVSLDKGDRKDRDLHEDLWFELSDETLCNWMMFVRPAQNHLEQNLVAYQYGHHVYYTTIKNVEPKQELKVWYAASYAEFVNRKIHDISEEERKVLREQEKNWPCYECNRRFISSEQLQQHLNSHDEKLDVFSRTRGRGRGRGKRRFGPGRRPGRPPKFIRLEITSENGEKCDDGTQDLLYFPTKEQFDEAEPATLNGLDQPEQPALAVPQLPPEAQSSLEHETETHELHLQPQHEESVLPAQSTLTADDMRRAKRIRNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQHLRFHGREGSCPLTCDLCNKGFISSASLESHMKLHSDQKTYSCIFCPESFDRLDLLKDHVAIHISDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPEREARKADRISRSKTFKPRITSTDYDSFTFKCRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKTKMVQHIRKKHPEYAQLPNTIHAPLTTAVISAAPAVLTTDSATGETVVTTDLLTQAMTELSQTLTTDYRTPQGDYQRIQYIPVSQSTSGLQQPQHIQLQVVQVAPATSPHQSQQSTVDVAQLHDPQTYTQHAIQVQHIQVTEPPTPAAPASQVAGQPLSPSPQQSQQGLSPSQVAGSSSQGQALQQQPQSTTVQHTYLPNAWNSFRGYSSEIQMMTLPPGQFVITDSGVATPVTTGQVKAVTPGHYVLSESQSELEEKQASALTGGVQVQPTAHGDLDPQTTSQQPTQYIITTTTNGNGSSEVHITKP*