Part of scaffold_734 (Scaffold)

For more information consult the page for scaffold_734 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NFRKB ENSTTRG00000009126 (Bottlenosed dolphin)

Gene Details

nuclear factor related to kappaB binding protein

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008685, Bottlenosed dolphin)

Protein Percentage 85.69%
cDNA percentage 84.81%
Ka/Ks Ratio 0.09087 (Ka = 0.0077, Ks = 0.0849)

NFRKB ENSBTAG00000017610 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053560, Cow)

Protein Percentage 94.11%
cDNA percentage 90.16%
Ka/Ks Ratio 0.06758 (Ka = 0.0285, Ks = 0.4213)

NFRKB  (Minke Whale)

Gene Details

nuclear factor related to kappaB binding protein

External Links

Gene match (Identifier: BACU010167, Minke Whale)

Protein Percentage 98.57%
cDNA percentage 97.88%
Ka/Ks Ratio 0.10744 (Ka = 0.007, Ks = 0.0651)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3987 bp    Location:806561..841068   Strand:+
>bmy_12505
ATGGATTCCTTGGACCATATGCTGACGGATCCCTTGGAGCTGGGCCCGTGTGGAGATGGCCACGGCACGCGGATCATGGAGGACTGCCTCCTGGGGGGCACTAGGGTTAGTCTGCCTGAGGACCTTCTGGAGGATCCCGAGATCTTCTTTGACGTAGTCAGCTTCTCAACGTGGCGGGAAGTACTGAGCGGCTCGCAGCGTGAGCACCTCCAGCAGTTTCTGCCGCGCCTTCCGGAGGACGGGACCGAGCATCAGGATGAGCTCGTCCTCGCCCTGTTCAGGGGCGAGAACTTCCGCTTTGGGAACCCTCTGCACATCGCCCAGAAGCTTTTCCGAGACGGACACTTCAACCCCGAGGTGGTCAAGTACAGGCAGCTGTGCTTCCGGTCGCAGTACAAACGCTACCTCAGCTCCCAGCAGCAGTACTTCCACCGGCTGCTGAAGCAGATCCTGGCCTCGCGGAGCGACCTGCTGGAGATGGCCCGGCGGAGCGGCCCCGCTCTCCCCTCCCGGCAGAAGCGCCCCTCACCGTCCCGCACCCCCGAGGAGCGGGAGTGGCGCACCCAGCAGCGCTACTTGAAGGTCCTGCGGGAAGTGAAGGAGGAGTGTGGGGACTCGGCCCTGTCGTCGGACGAGGAGGATCTCAGCTCATGGCTCCCGAGCTCTCCAGCGCGCTCTCCTAGCCCTGCAGTGCCCCTCAGGGTGGTGCCCACGCTTTCCACCACGGACATGAAGACTGCAGATAAAATAGAACTGGGGGACAGTGACCTGAAGATAATGCTAAAGAAACACCATGAGAAGCGGAAACACCAACCAGATCACCCAGACCTTTTGACGGGGGACCTGACTCTCAATGACATCATGACTCGAGTAAATGCCGGCAGGAAGGGCTCTCTAGCAGCACTATATGACTTGGCTGTCCTTAAAAAAAAGGTTAAGGAAAAAGAGGAAAGGAAGAAGAAGAAAATAAAAATGATCAAATCAGAGGCAGAGGATCTGGCGGAACCCCTAAGCGGTACTGAAGGGCTCCCACCCCTCTCACAGGCACCGTCTCCACTGGCCATACCTGCTATCAAGGAGGACTTCTTCTCTCTTCTCTTGGAGATCTTGTTGCTGGAGGGGCAGGCTAGCCTTCCTATGCTAGAGGAGCGAGTTTTGGACTGGCAGTCGTCTCCAGCCAGCTCCCTCAATAGCTGGTTCTCTGCGGCCCCCAACTGGGCAGAGTTGGTGTTACCAGCCTTGCAGTATCTTGCTGGAGAAAGCCGTGCAATCTCTCTGACCTGTGTGGCTTGTTCATGGGATCCATTTCTTGCAGCTGTACCTTCCAGCTTCTCTCCATTTGTTGGCTTCAAAGAGAAAACCCAGCAGTGGAAGTTGCTTGGCCAGTCCCAAGATAATGAAAAGGAATTAGCTGCACTCTTCCAGCTGTGGCTGGAAACTAAAGACCAGGCCTTCTGTAAGCAAGAAAATGAAGACAGCTCAGACGCCACAACGCCTGTTCCTCGGGTAAGAACTGACTATGTGGTGCGGCCCAGCACGGGAGAGGAGAAGCGAGTTTTTCAGGAGCAGGAGCGTTACCGGTACAGCCAGCCCCACAAGGCATTCACCTTTCGCATGCATGGCTTTGAGTCCGTGGTGGGGCCCGTGAAGGGCGTGTTCGACAAGGAGACGTCGCTCAACAAGGCACGGGAACACTCCCTGCTGCGCTCCGACCGGCCCGCCTACGTCACCATCTTGTCCCTGGTTCGCGACGCGGCGGCCCGGCTGCCCAACGGGGAGGGCACGCGGGCGGAGATCTGCGAGCTGCTCAAGGACTCCCAGTTCCTAGCTCCAGACGTCACCAGCACTCAGGTGAATACAGTGGTGAGTGGTGCCCTGGATCGGCTGCATTACGAGAAGGACCCGTGTGTGAAGTACGACATCGGACGGAAGTTGTGGATCTACCTGCATCGGGACCGGAGCGAGGAAGAGTTCGAGCGGATCCACCAGGCCCAAGCAGCTGCAGCTAAAGCCAGGAAAGCCCTTCAGCAAAAACCCAAGCCCCCATCCAAGGTGGTAAGTGACCTCGCGGGATGGTGGCGGAGGGGCTGTGGCGTCCCCGCGGGCCTTGCTCATGCCCGCGTCCGTGCGCACCCCGTCCTTGTGCAGAAGTCCAGCAGCAAGGAGGGTTCGGTGAAGGTCCTCGGCGCTGGCCCTTCCGAGCAGAGCCAGCTGAGCCTCAGCGACTCCAGCATGCCCCCCACCCCGGTCACGCCTGTGACCCCCACCACTCCTGCTCTGCCCGCCACGCCCATCTCCCCCCCGCCCGTGCCATCAGTGAACAAAAGTGGCCCCACGACTGTCTCGGAACCGGTGAAGTCCACTTCGGGCGTTCTTCTCGTGTCTTCGCCGACGATGCCGCAGCTGGGAACTATGCTCTCCCCAGCGTCCAGCCAGACTCCACCGAGTTCTCAGGCTGCCGCCCGTGTCGTGAGCCACTCCGGCTCGGCTGGACTCCCCCAAGTGCGGGTGGTGGCCCAGCCCAGCCTTCCTGCGGTGACTCAGTCGGCGGGGCCGGCACCGACGCTGCCGCAGATGACAGCAGGACCGCAGATTCGCGTGCCGGCCACGGCCGTGCAGACCAAAGGCGGGCCCCAGACAGTAATGGCCACCGTTCCAGTCAAAGCTCAGACTGCGGCAGCCACCGTGCAGCGGCCGGGACCGGGGCCGGCGGGGCTCACGGTGACAAGTCTCCCTGCCGCAGCCAACCCTGCGAGCAAGCCAGCCACCAGTTCTCCTGGGGGCTCTGCTCCGAGCACCCCCGCGGCTGCCGTCATTCAGAACGTCACAGGACAGAACATTATCAAGCAGGTGGCCATCACTGGGCAGCTTGGCGTGAAGCCCCAGACGGGCAGCAGCATCCCACTCACAGCCACTAACTTCCGTATCCAGGGCAAGGACGTGCTGCGGCTACCGCCCTCCTCCATCACCACGGACGCCAAAGGCCAGACTGTTCTGCGGATCACTCCAGACATGATGGCCACGTTGGCCAAGTCCCAGGTCACCACAGTCAAACTGACCCAGGACCTCTTTGGGACAGGCAGCGGCCCCTCGGGCAAAGGCATCTCCGCTACCTTACACGTCACTTCCAACACGGTCCACGCAGCTGACAGCCCTGCCAAGGCCAGTGCAGCCAGTGCCCCCTCATCCACTCCACCAGGGACCACCGTGGTCAAAGTGACTCCCGACCTCAAGCCAACAGAAGCCTCGAGTTCAGCTTTTCGCTTGATGCCAGCGCTTGGCGTGAGTGTGGCTGACCAGAAGGGGAAAAACACTGTGGCCTCATCTGAAGCCAAACCAGCCGCCACCATCCGCATCGTGCAGGGCCTGGGGGTGATGCCCCCCAAAGCAGGCCAGACCATCACCGTCGCAGCCCATGCCAAGCAAGGGCCCTCCGTGGCCAGTGGGTCTGGAACTGTCCATACGTCTGCGGTGTCCTTGCCCAGTGTGAATGCTGCCGTGTCCAAGACTGTGGCCGTGGCTTCTGGGGCTGCCAGCACCCCCATCAGCATCGGGACGGGAGCCCCTGCCATGCGGCAGGTCCCCGTCAGCACCACGGTTGTTTCCACGTCCCAGGCTGGGAAGCTGCCTACACGGATCACAGTTCCACTCTCTGTCATTAGCCAGCCCATGAAGGGCAAGGGTGTGGTCACAGCCCCCATCATCAAAGGCAACCTTGGAGCCAACCTCGGCGGGCTGGGCCGTAACATCATCCTCACCACCATGCCAGCGGGCACGAAGCTCATTGCTGGCAACAAGCCGGTTAGCTTCCTCACCGCCCAGCAGTTGCAGCAGCTCCAGCAGCAGGGTCAGGCCACACAGGTGCGCATCCAGACTGTCCCCGCGTCCCACCTTCAACAAGGAACAGCTTCTGGTTCCTCCAAAGCCGTCTCCACGGTCGTCGTGACCACAGCCCCGTCTCCTAAACAGGCACCTGAACAGCAGTGA

Related Sequences

bmy_12505T0 Protein

Length: 1329 aa      View alignments
>bmy_12505T0
MDSLDHMLTDPLELGPCGDGHGTRIMEDCLLGGTRVSLPEDLLEDPEIFFDVVSFSTWREVLSGSQREHLQQFLPRLPEDGTEHQDELVLALFRGENFRFGNPLHIAQKLFRDGHFNPEVVKYRQLCFRSQYKRYLSSQQQYFHRLLKQILASRSDLLEMARRSGPALPSRQKRPSPSRTPEEREWRTQQRYLKVLREVKEECGDSALSSDEEDLSSWLPSSPARSPSPAVPLRVVPTLSTTDMKTADKIELGDSDLKIMLKKHHEKRKHQPDHPDLLTGDLTLNDIMTRVNAGRKGSLAALYDLAVLKKKVKEKEERKKKKIKMIKSEAEDLAEPLSGTEGLPPLSQAPSPLAIPAIKEDFFSLLLEILLLEGQASLPMLEERVLDWQSSPASSLNSWFSAAPNWAELVLPALQYLAGESRAISLTCVACSWDPFLAAVPSSFSPFVGFKEKTQQWKLLGQSQDNEKELAALFQLWLETKDQAFCKQENEDSSDATTPVPRVRTDYVVRPSTGEEKRVFQEQERYRYSQPHKAFTFRMHGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAARLPNGEGTRAEICELLKDSQFLAPDVTSTQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRDRSEEEFERIHQAQAAAAKARKALQQKPKPPSKVVSDLAGWWRRGCGVPAGLAHARVRAHPVLVQKSSSKEGSVKVLGAGPSEQSQLSLSDSSMPPTPVTPVTPTTPALPATPISPPPVPSVNKSGPTTVSEPVKSTSGVLLVSSPTMPQLGTMLSPASSQTPPSSQAAARVVSHSGSAGLPQVRVVAQPSLPAVTQSAGPAPTLPQMTAGPQIRVPATAVQTKGGPQTVMATVPVKAQTAAATVQRPGPGPAGLTVTSLPAAANPASKPATSSPGGSAPSTPAAAVIQNVTGQNIIKQVAITGQLGVKPQTGSSIPLTATNFRIQGKDVLRLPPSSITTDAKGQTVLRITPDMMATLAKSQVTTVKLTQDLFGTGSGPSGKGISATLHVTSNTVHAADSPAKASAASAPSSTPPGTTVVKVTPDLKPTEASSSAFRLMPALGVSVADQKGKNTVASSEAKPAATIRIVQGLGVMPPKAGQTITVAAHAKQGPSVASGSGTVHTSAVSLPSVNAAVSKTVAVASGAASTPISIGTGAPAMRQVPVSTTVVSTSQAGKLPTRITVPLSVISQPMKGKGVVTAPIIKGNLGANLGGLGRNIILTTMPAGTKLIAGNKPVSFLTAQQLQQLQQQGQATQVRIQTVPASHLQQGTASGSSKAVSTVVVTTAPSPKQAPEQQ*