Sequence details bmy_12527 (Coding sequence)

Part of scaffold_740 (Scaffold)

For more information consult the page for scaffold_740 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VSNL1 ENSTTRG00000015908 (Bottlenosed dolphin)

Gene Details

visinin-like 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015074, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 97.77%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.1441)

VSNL1 ENSBTAG00000017158 (Cow)

Gene Details

Visinin-like protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022814, Cow)

Protein Percentage 100.0%
cDNA percentage 94.79%
Ka/Ks Ratio 0.001 (Ka = 0.0003, Ks = 0.3443)

Additional orthologs identified in other species via the OPTIC pipeline.

VSNL1 (Human)  

Genome Location

Sequence Coding sequence

Length: 642 bp    Location:764703..828835   Strand:+
Raw sequence 
>bmy_12527
ATGGAGGACCTGGTGAAGAGCACAGAGTTTAATGAACATGAGCTCAAGCAGTGGTACAAAGGGTTTCTCAAGGACTGTCCAAGCGGGAGGCTGAATCTCGAGGAATTTCAGCAGCTCTACGTGAAGATATCCCATCAGTCCTTCATCAGAGGACCCCGGGGGACAGGTCTGGCACCGGAGCCCAACTTGCCTACCCTTCTGAGGCTCCTGCCCTCTGTCCTCATCGGGTTCTTCCCGTATGGAGACGCCTCCAAGTTCGCCCAGCACGCCTTCCGGACCTTCGACAAGAACGGGGACGGCACCATCGACTTCCGAGAGTTCATCTGCGCGCTCTCCATCACCTCCAGGGGCAGCTTCGAGCAGAAGCTAAACTGGGCCTTCAACATGTACGACCTGGACGGCGACGGCAAGATCACCCGCGTGGAGATGCTGGAGATCATTGAGGCTATCTACAAAATGGTGGGCACCGTGATCATGATGAAAATGAATGAGGATGGTCTCACGCCTGAGCAGCGAGTAGACAAGATTTTCAGCAAGATGGATAAGAACAAAGACGACCAGATTACACTGGATGAATTCAAAGAAGCTGCAAAGAGCGACCCTTCCATCGTATTACTTCTGCAGTGCGACATTCAGAAATGA

Related Sequences

bmy_12527T0 Protein

Length: 214 aa      View alignments
>bmy_12527T0
MEDLVKSTEFNEHELKQWYKGFLKDCPSGRLNLEEFQQLYVKISHQSFIRGPRGTGLAPEPNLPTLLRLLPSVLIGFFPYGDASKFAQHAFRTFDKNGDGTIDFREFICALSITSRGSFEQKLNWAFNMYDLDGDGKITRVEMLEIIEAIYKMVGTVIMMKMNEDGLTPEQRVDKIFSKMDKNKDDQITLDEFKEAAKSDPSIVLLLQCDIQK*