Sequence detailsbmy_12583 (Coding sequence)

Part of scaffold_750 (SequenceType object (1))

For more information consult the page for scaffold_750 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

THYN1ENSTTRG00000002355 (Bottlenosed dolphin)

Gene Details

thymocyte nuclear protein 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002206, Bottlenosed dolphin)

Protein Percentage 94.07%
cDNA percentage 95.06%
Ka/Ks Ratio 0.27862 (Ka = 0.032, Ks = 0.1149)

THYN1ENSBTAG00000012936 (Cow)

Gene Details

thymocyte nuclear protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000017187, Cow)

Protein Percentage 80.3%
cDNA percentage 85.35%
Ka/Ks Ratio 0.36516 (Ka = 0.1258, Ks = 0.3446)

THYN1 (Minke Whale)

Gene Details

thymocyte nuclear protein 1

External Links

Gene match (Identifier: BACU018611, Minke Whale)

Protein Percentage 92.59%
cDNA percentage 95.31%
Ka/Ks Ratio 0.59723 (Ka = 0.0418, Ks = 0.07)

Additional orthologs identified in other species via the OPTIC pipeline.

THYN1 (Human)   Thyn1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 408 bp    Location:785044..778378   Strand:-
Raw sequence 
>bmy_12583
ATGCCGCGAGCGCGGAAGAGGCCGGCGGGGGCCGCGAGGCCAGACAAGAAGGGGCCAGAAGGAAAACGTACCAAAACTGAGAACCCAGGGGAGGCATCAGCTAAGGTGGAGAACTCCAGCCTCCAGGAGACTTCAGCCTCTAAAGACTGTGGGAAGAATCTAAGCAGCTACTGGCTGATGAAGTCAGAGCCAGAAAGCCGACTGGAGAAAGGTGTAGATGTGAAGTTCAGCATTGAGGATCTCAAAGCACAGCCCAAGCAGACAGCATGCTGGGATGGTGTTCGCAACTACCAGGCCCGGAACTTCCTGAGAGCCATGAAGCTGGAGGAAGAAGCCTTTTTCTACCACAGCAACTGCAGAGAGCCAGGCATTGCGGGGCTTATGAAGAGGAGTTTGATTTTATTTTGA

Related Sequences

bmy_12583T0 SequenceType object (3)

Length: 136 aa      View alignments
>bmy_12583T0
MPRARKRPAGAARPDKKGPEGKRTKTENPGEASAKVENSSLQETSASKDCGKNLSSYWLMKSEPESRLEKGVDVKFSIEDLKAQPKQTACWDGVRNYQARNFLRAMKLEEEAFFYHSNCREPGIAGLMKRSLILF*