Part of scaffold_762 (Scaffold)

For more information consult the page for scaffold_762 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CD180 ENSTTRG00000010096 (Bottlenosed dolphin)

Gene Details

CD180 molecule

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009575, Bottlenosed dolphin)

Protein Percentage 96.13%
cDNA percentage 97.26%
Ka/Ks Ratio 0.37448 (Ka = 0.018, Ks = 0.048)

BT.22214 ENSBTAG00000006360 (Cow)

Gene Details

CD180 antigen precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008348, Cow)

Protein Percentage 89.41%
cDNA percentage 92.79%
Ka/Ks Ratio 0.47005 (Ka = 0.057, Ks = 0.1213)

CD180  (Minke Whale)

Gene Details

CD180 molecule

External Links

Gene match (Identifier: BACU019657, Minke Whale)

Protein Percentage 97.58%
cDNA percentage 98.55%
Ka/Ks Ratio 0.50402 (Ka = 0.0101, Ks = 0.02)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1986 bp    Location:27479..42880   Strand:+
>bmy_12611
ATGGCTCCCCGTGTCGGCTGCTTCCTGTTGGCGGTGCTGATTTCTGCCAGCTGTAAAGTCATCACCTCCTCAAATCCAATGTGCACTGAGAAAGAAGCCAACAAGACATATAACTGTGAAAATTTAGGTCTCAGAGAAATTCCTGACACTCTACCAAATACAACAGAATTTTTGGAATTCGGCTTTAACTTCTTGCCTACARTTCAAAATATAACCTTCAGCAGGCTCATAAATCTTATCTTTTTGGATTTGACCAGGTGCCAGATTAACTGGGTACATGAAGATACTTTTCAAAACCATCATCAACTGAACACCATTGTGTTAACTGGAAATCCCCTGATATTCATGGCAGAAACATCACTTACCGGGCCCAAGTTGCTGAAGCATCTTTTCTTAACCCAAACAGGAATATCCAATCTTGAGTTTATCCCAGTGCACAACCTGGAAAACTTGGAAAGTTTGCATCTTGGAAGCAACCATATTTCYTCCATTAATCTCCCAGAAAACTTCCCAACACAGAATCTGAAAGTCCTGGATTTTCAGAATAATGCTATACACTACATCTCTAGTAAAGACATAAACGCTCTGGAACAGGCCACGAACCTAAGCCTTAACTTCAATGGCAATGACATTAAAGGCATTGAGCCTGGGGCTTTCAATTCAAAAATCTTTCAAAGTTTGAAATTTGGAGGGTCTCTCAACTTATCTGTTATATTGAAAGGTCTACAGAACTCTACTATTCAGTCTCTTTGGCTGGGGACATTTGAGGACACTGATGACCAAGACCTCACTTCAGCCACATTTGAGGGACTTTGTGACATGGCTGTTGAGAGCATCAACCTACAAAAGCACCATTTCGATGGCTTCTCACCTTCTACATTTCGGTGCTTCACTCGACTCCAGGAGTTGGATCTGACGGCAGCTCACTTGAAAGGATTACCCTCTGGGATTGAGGGCATGAACTCTCTCAAGAAATTAGTTCTCAATGCAAATAGTTTTGACCAATTGTGTCAAATCAATGCTGCCAGTTTCCCATCCCTTACAGACCTCTATGTCAAAGGCAACATGAACAAACTTGACCTCGGTGCCAGGTGTTTGGAAAAACTAGAAAATCTTCAGAAACTTGATTTAAGTCACAGTGATATTGAGGCTTCTGACTGTTGCAATCTGCAACTCAAAAACCTGCCCCACTTGCAATACTTAAACCTGAGCTACAATGAGCCCCTTGGTCTCGAGGATCAGGCATTCAAAGAATGTCCTCGGCTAGAACTCCTGGATTTGGCATTTACCCACCTGCTTGTTAAGGCTTCACAAAGTCCTTTCCAAAACCTCCATCTCCTGCGGGTTCTGAATCTCTCTCACTGCCTCCTTGATACCAGCAATCATCACCTTCTAGAAGGCCTGCTGGATCTCCGGCATCTGAATGTACAAGGGAATCACTTTCAAGATGGGAGCATCTCAAAGACCAACCTACTTCAGACAGTGAGCAGCTTGGAGATTCTGATTTTATCCTCTTGTGACCTCCTCTCCATAGACCAGCAAGCATTCCACGGCCTTGGGAAAATGAGCCACTTAGACTTAAGCCACAACAGCCTGACAGGCRATAGCATGGATGCGCTTAGCCCTCTTAAGGGGATCTACCTCAATCTGGCCGCCAATAACATWCGCATCATCCCACCCCATCTCCTCCCCACCTTGTCTCAGCAGAGCACCATTAATTTAAGTCACAATCCCCTGGACTGCACTTGCTCAAATATCCATTTCATAACATGGTACAAAGAAAACCTGCATAAACTTGAGGGCTCGGAGGAGACCGTGTGTGCAAATCCCCCACGTTTACGGGGAGTTAAGCTGTCTGATGTCAAACTGTCTTGTGGGCTGACGGGGATGGGCATTTTCTTTCTTGTAGTATTTGTATTCTTGCTCATCATTCTGCTCATTTTTTCAGTTAAATTTCTTCTTAGGTGGAAATACCAGCACATTTAG

Related Sequences

bmy_12611T0 Protein

Length: 662 aa      View alignments
>bmy_12611T0
MAPRVGCFLLAVLISASCKVITSSNPMCTEKEANKTYNCENLGLREIPDTLPNTTEFLEFGFNFLPTXQNITFSRLINLIFLDLTRCQINWVHEDTFQNHHQLNTIVLTGNPLIFMAETSLTGPKLLKHLFLTQTGISNLEFIPVHNLENLESLHLGSNHISSINLPENFPTQNLKVLDFQNNAIHYISSKDINALEQATNLSLNFNGNDIKGIEPGAFNSKIFQSLKFGGSLNLSVILKGLQNSTIQSLWLGTFEDTDDQDLTSATFEGLCDMAVESINLQKHHFDGFSPSTFRCFTRLQELDLTAAHLKGLPSGIEGMNSLKKLVLNANSFDQLCQINAASFPSLTDLYVKGNMNKLDLGARCLEKLENLQKLDLSHSDIEASDCCNLQLKNLPHLQYLNLSYNEPLGLEDQAFKECPRLELLDLAFTHLLVKASQSPFQNLHLLRVLNLSHCLLDTSNHHLLEGLLDLRHLNVQGNHFQDGSISKTNLLQTVSSLEILILSSCDLLSIDQQAFHGLGKMSHLDLSHNSLTGBSMDALSPLKGIYLNLAANNIRIIPPHLLPTLSQQSTINLSHNPLDCTCSNIHFITWYKENLHKLEGSEETVCANPPRLRGVKLSDVKLSCGLTGMGIFFLVVFVFLLIILLIFSVKFLLRWKYQHI*