Part of scaffold_757 (Scaffold)

For more information consult the page for scaffold_757 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CTSO ENSTTRG00000000655 (Bottlenosed dolphin)

Gene Details

cathepsin O

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000617, Bottlenosed dolphin)

Protein Percentage 61.44%
cDNA percentage 64.49%
Ka/Ks Ratio 0.72812 (Ka = 0.2388, Ks = 0.328)

BT.28045 ENSBTAG00000011063 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014691, Cow)

Protein Percentage 77.1%
cDNA percentage 81.51%
Ka/Ks Ratio 0.39405 (Ka = 0.1618, Ks = 0.4107)

CTSO  (Minke Whale)

Gene Details

cathepsin O

External Links

Gene match (Identifier: BACU010666, Minke Whale)

Protein Percentage 93.79%
cDNA percentage 96.41%
Ka/Ks Ratio 0.69398 (Ka = 0.0333, Ks = 0.048)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1092 bp    Location:409119..428679   Strand:+
>bmy_12614
ATGGAGCTGCGGCGCCTCTGGCTGCTCTGCTGCTGCTGCGGCTGCTGCCCCGGCGCCGCCCCGGCCCCGCCGAGCGGCCGCAACCCGCCCGCCGCCTTCCGGATGACCTTCCATCGTGATCTGCAGGAAATAAATCAAGCTTTAACTTTTGCATCTGAAAGCTATCTCCAAGAAAGTCTTAATAGACATCGAAAGTTGAATTCTTTATTTCCTGGTGAAAACTCCACTGCCGTCTATGGAATAAATCAGTTTTCTTATTTGTTCCCTGAAGAGTTTAAAGCTATTTATTTACGAAGCAGACCTTCCAGTTTTCCCCGGTTTCTGGCAGGCGTGCACACATCCATCTCCAACTTGTCTTTGCCGTTAAGATTTGACTGGAGGGACAAGCACGTCGTCACCCCAGTGAGGAACCAGCAGACATGTGGCGGATGCTGGGCCTTCACCGTGGTGGGAGCAGTGGAGTCCGCGTGCGCCATAAAAGGGCAGCCTTTGGAGGCGCTGAGTGTCCAGCAGGTCCTAGACTGTTCATACAGCAACTACGGCTGCAACGGAGGGTCCCCGCTCAACGCTTTGAACTGGCTCAGTAAGATGCAAGTGAAGCTGGTGAGAGATTCAGAATACCCGTTTAAAGCCCAGAATGGTCTGTGCCGTTACTTTTCTGACTCACATTCTGGATTTTCAATCAAAGGTTATTCTGCCTATGACTTCCGTGACCACGAAGACGAAATGGCAAAAGCACTGTTTACCTTGGGCCCTCTGATAGTGGTAGTAGATGCCGTGAGCTGGCAAGATTATCTGGGAGGCATCATACAGCATCATTGCTCTAGTGGAGAAGCAAATCACGCCGTTCTGGTAACCGGCTTTGATAAAACAGAGCGCAAGCACCCTAGCCAGGCCTCTGCTTTCAGCTTCACCGGGGCTCTGCAGATAAAGGGCCGCTGCCACTCCTGGAAGCCCTGCTGCCCCCACAGTTTATCCCCAGCTGCGGAGCGAGGGGCCTGCATCTGGGCTGAGGGGCGGCTGCTTTCACAGCCCTGGCAGGGGTGCTGCGAGGACGTGATCCGGATGCTGGTTCAGCATCACCTTGATTAG

Related Sequences

bmy_12614T0 Protein

Length: 364 aa      View alignments
>bmy_12614T0
MELRRLWLLCCCCGCCPGAAPAPPSGRNPPAAFRMTFHRDLQEINQALTFASESYLQESLNRHRKLNSLFPGENSTAVYGINQFSYLFPEEFKAIYLRSRPSSFPRFLAGVHTSISNLSLPLRFDWRDKHVVTPVRNQQTCGGCWAFTVVGAVESACAIKGQPLEALSVQQVLDCSYSNYGCNGGSPLNALNWLSKMQVKLVRDSEYPFKAQNGLCRYFSDSHSGFSIKGYSAYDFRDHEDEMAKALFTLGPLIVVVDAVSWQDYLGGIIQHHCSSGEANHAVLVTGFDKTERKHPSQASAFSFTGALQIKGRCHSWKPCCPHSLSPAAERGACIWAEGRLLSQPWQGCCEDVIRMLVQHHLD*