Part of scaffold_752 (Scaffold)

For more information consult the page for scaffold_752 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LAMP3 ENSTTRG00000016519 (Bottlenosed dolphin)

Gene Details

lysosomal-associated membrane protein 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015660, Bottlenosed dolphin)

Protein Percentage 79.36%
cDNA percentage 85.56%
Ka/Ks Ratio 0.77756 (Ka = 0.1522, Ks = 0.1957)

LAMP3 ENSBTAG00000006552 (Cow)

Gene Details

lysosome-associated membrane glycoprotein 3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008608, Cow)

Protein Percentage 68.35%
cDNA percentage 77.59%
Ka/Ks Ratio 0.7362 (Ka = 0.2612, Ks = 0.3548)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1074 bp    Location:629653..638622   Strand:+
>bmy_12633
ATGTCCTGGCAGCTCTCTGCAGTGGTGGTGCTCTTCGTGTCCCTGACCGTGATTTTGCATTATGGCAGTCATATGAGAGCAAAAGCGTTTCCAGAAATCACAGGCTATTCTCCACCTGCAACAGTACAGGCCACAGCCAAACCTTCTCTCCTGCAGCCAACGAACCGTGTGCCTCAGAAAACTTTAGCAACAAGGTCAACAGATGGGCATGTCACCTCTCAGAYAGCTGTCACAACATCCACCTCTGAGACCCTAACCACACACACAACCATAAAGATTCTAGCAACAGCTTCCCTGGTAACTACAGACAGCACCCCCTCCACCAGCCCGACAGCCCACACCCTAGTCACAGCCCTGGCCACACCCAACAAGTCACACACGGCTGCTCCGGTCACTGAGGCTACAATCAGCCCCAGCACTGGTCCCAGCCCACCACCACCCACCGTCACCCCGCCAGCCCACAGAACTGGAGCCAGGCCGTCGACTGTTGGCCATACAACTGGGAAGACCACCCAACTCCGTAACGAGACCACCCTGCCAGCACCTTTGTCCACCTCACCACACAATAGCACAACCAGTCGGAAGCCTACTCAACCCCCCCACGCCCCAGGGCCCACCAACACAACCCAAACAACCTCGCCTGCCACCGTAGCTCCCAGGCCCACCCTCGCACCCCAGCCATCATCAGCCAAGACTGGAATTTATCAAGTTCTGAATGGAAGCCAGCTCTGTATCAAAGCAGAGATGGGGATAGAGCTGACGGTTCAAGACACGGAATCGGTTTTTTCACCTCAGAAATACTTCAACATCGACCCCAATGCAACCCAATCCTCTGGGAACTGTGGCTTCCGAAAATCCAACCTCCTCTTGAATTTCCAGGGCGGATTTGTGAATCTGACATTTACCAAGGCTCCTCTGTGCAGCCCAAGAAGGGCTTTGATGCCTCTTGGGAGAGATGTGGCCTTGGGGAACCTGGCCAAAGTGCCATTTGCAAACCACCCCAAGGAGGAAGCTGTACGGATGAACAGACCCATAGAAATACCCAGTGGGCAAAAAGAAACAGGATTACTCTGA

Related Sequences

bmy_12633T0 Protein

Length: 358 aa      View alignments
>bmy_12633T0
MSWQLSAVVVLFVSLTVILHYGSHMRAKAFPEITGYSPPATVQATAKPSLLQPTNRVPQKTLATRSTDGHVTSQXAVTTSTSETLTTHTTIKILATASLVTTDSTPSTSPTAHTLVTALATPNKSHTAAPVTEATISPSTGPSPPPPTVTPPAHRTGARPSTVGHTTGKTTQLRNETTLPAPLSTSPHNSTTSRKPTQPPHAPGPTNTTQTTSPATVAPRPTLAPQPSSAKTGIYQVLNGSQLCIKAEMGIELTVQDTESVFSPQKYFNIDPNATQSSGNCGFRKSNLLLNFQGGFVNLTFTKAPLCSPRRALMPLGRDVALGNLAKVPFANHPKEEAVRMNRPIEIPSGQKETGLL*