Part of scaffold_753 (Scaffold)

For more information consult the page for scaffold_753 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BT.41071 ENSBTAG00000025893 (Cow)

Gene Details

cadherin-12 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000036542, Cow)

Protein Percentage 96.05%
cDNA percentage 94.83%
Ka/Ks Ratio 0.11394 (Ka = 0.0187, Ks = 0.164)

CDH12  (Minke Whale)

Gene Details

cadherin 12, type 2 (N-cadherin 2)

External Links

Gene match (Identifier: BACU012860, Minke Whale)

Protein Percentage 98.18%
cDNA percentage 97.87%
Ka/Ks Ratio 0.15134 (Ka = 0.0086, Ks = 0.057)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 990 bp    Location:758235..746743   Strand:-
>bmy_12642
AACCCATTATTAACCAGCAGAGTCAACATATTAATTAATGTCCTAGATGTCAATGAATTTCCTCCCGAAATATCTGTGCCATATGAGACAGCTGTGTGTGAAAATGCTAAACTAGGACAGATAATTCAGATAGTCAGCGCTGCAGACCGAGATCTTTCACCTGCTGGGCAGCAATTCTCCTTTAAATTATCACCTGAAGCTGCCATCAAACCAAATTTTACAATTCGTGACTTCAGAAACAACACAGCTGGCATTGAAACCCGAAGAAATGGATACAGCCGCAGGCAGCAGGAGTTGTATTTCCTCCCTGTTGTGATAGAAGACAGCAGCTATCCTGTCCAGAGCAGCACAAACACAGTGACTATTCGAGTGTGTAGATGTGACTCTGATGGCACCATCCTGTCTTGTAACGTGGAAGCCATTTTTCTTCCTGTAGGACTTAGCACTGGGGCTTTGATTGCAATCCTACTGTGCATTGTTATACTCTTAGCCATAGTTGTGCTGTATGTAGCTCTGCGAAGGCAGAAGAAGAAAGACACCCTGATGACCTCTAAAGAAGACATCAGAGACAATGTTATCCATTATGATGATGAAGGAGGCGGGGAGGAGGACACCCAGGCTTTCGACATTGGTGCTCTGAGAAACCCAAAAGTGATTGAAGATAACAAAATTCGCAGGGATATAAAACCAGACTCTCTCTGTTTGCCTCGTCAGAGACCACCAGTGGACGATAACGCAGACATAAGGGATTTCATTAATCAAAGGCTACAGGAAAATGATGTGGACCCCACCGCCCCACCATACGATTCATTGGCAACATATGCCTATGAAGGCAATGGATCAGTAGCCGACTCTCTTAGCTCCATAGGGTCTCTGACCATGGAAGCGGACCAGGACTACACCTATCTAACAGACTGGGGACCGCACTTTAAAGTCTTGGCAGACATGTTTGGTGAAGAAGAGAGTTATAACACTGATAAAGTCACTTAG

Related Sequences

bmy_12642T0 Protein

Length: 330 aa     
>bmy_12642T0
NPLLTSRVNILINVLDVNEFPPEISVPYETAVCENAKLGQIIQIVSAADRDLSPAGQQFSFKLSPEAAIKPNFTIRDFRNNTAGIETRRNGYSRRQQELYFLPVVIEDSSYPVQSSTNTVTIRVCRCDSDGTILSCNVEAIFLPVGLSTGALIAILLCIVILLAIVVLYVALRRQKKKDTLMTSKEDIRDNVIHYDDEGGGEEDTQAFDIGALRNPKVIEDNKIRRDIKPDSLCLPRQRPPVDDNADIRDFINQRLQENDVDPTAPPYDSLATYAYEGNGSVADSLSSIGSLTMEADQDYTYLTDWGPHFKVLADMFGEEESYNTDKVT*