Sequence detailsbmy_12648 (Coding sequence)

Part of scaffold_758 (SequenceType object (1))

For more information consult the page for scaffold_758 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LBX1ENSTTRG00000014899 (Bottlenosed dolphin)

Gene Details

ladybird homeobox 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000014116, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 98.91%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.0738)

BT.54498ENSBTAG00000002261 (Cow)

Gene Details

transcription factor LBX1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000032830, Cow)

Protein Percentage 99.28%
cDNA percentage 96.63%
Ka/Ks Ratio 0.01331 (Ka = 0.0029, Ks = 0.2194)

Additional orthologs identified in other species via the OPTIC pipeline.

LBX1 (Human)   Lbx1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1209 bp    Location:52677..50742   Strand:-
Raw sequence 
>bmy_12648
TACGGGATCGGCGCCCTCGCCTCGGCTCTTCCAACTGCCGCCGCCAGGACCCGGGGCCAGGAGCCGCCGCGGAGCCACCTGACACCTTTAAATAGCACCGGGGCTGGCGAAACTGGAGCCCCGCGCGGCGCGCTCCGGCTCGCGCCCCGGATTGCTGGAAGCCCCGGCGGCGGCAGCGCCCGCGTCAGCGCCCTCCTCCTGGGGCCCCGTGCGGCTGTGCTCGCCTCTGCCACTGCGCTAATCGGCCCCGAGCCCGGCCCGCGCGCTGCCGGGCGCGGCCTCCTTCCCGCCTGCCGCCCGCCCGCGCCTCCCGGCGCCCGAGCTGCCCGCGGGCTGGCCGCCCCGGCCGGGCCCCCAAACGAGGCCGAGATGACTTCCAAGGAGGACAGCAAGGCGGCGCCGGGGGAGGAGAGGCGGCGCAGCCCGCTGGACCACCTGCCTCCTCCTGCCAACTCCAACAAACCGCTGACGCCGTTCAGCATCGAGGACATCCTCAACAAGCCTTACTCGCTGTGCGGGGCGGCGCACCTGCTGGCGGCCGCGGACAAGCACGCGCCGGGCGGCTTGCCCCTGGCGGGCCGCGCGCTGCTCTCGCAAACCTCGCCGCTGTGCGCGCTGGAGGAGCTCGCCAGCAAGACTTTTAAGGGGCTGGAGGTCAGCGTCCTGCAGGCAGCCGAAGGCCGCGACGGGATGACCATCTTTGGGCAGCGGCAGACCCCCAAGAAGCGGCGAAAGTCGCGCACGGCCTTCACCAACCACCAGATTTACGAGTTGGAGAAGCGCTTCCTCTACCAGAAGTACCTGTCCCCCGCCGATCGCGACCAAATTGCGCAGCAGCTGGGCCTCACCAATGCTCAGGTCATCACCTGGTTCCAGAATCGGCGTGCCAAGCTCAAACGGGACCTGGAGGAGATGAAGGCCGACGTGGAGTCCGCCAAGAAACTGGGCCCCAGCGGGCAGATGGACATCGTGGCGCTGGCCGAACTCGAGCAGAACTCGGAGGCTGCGGGCGGCGGCGGCGGCGGCGGCGGCGGCTGCGGCAGGGCTAAGTCAAGGCCTGGCTCTCCGGCACTCCCCCCAGGCGCCCCGCAGGCCCCGGGCGCCGGGCCCCTGCAGCTCTCGCCCGCCTCCCCGCTCACGGACCAGCCGGCCAGCAGCCAGGACTGCTCGGAGGACGAGGAAGACGAAGAGATCGACGTGGACGATTGA

Related Sequences

bmy_12648T0 SequenceType object (3)

Length: 403 aa      View alignments
>bmy_12648T0
YGIGALASALPTAAARTRGQEPPRSHLTPLNSTGAGETGAPRGALRLAPRIAGSPGGGSARVSALLLGPRAAVLASATALIGPEPGPRAAGRGLLPACRPPAPPGARAARGLAAPAGPPNEAEMTSKEDSKAAPGEERRRSPLDHLPPPANSNKPLTPFSIEDILNKPYSLCGAAHLLAAADKHAPGGLPLAGRALLSQTSPLCALEELASKTFKGLEVSVLQAAEGRDGMTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADVESAKKLGPSGQMDIVALAELEQNSEAAGGGGGGGGGCGRAKSRPGSPALPPGAPQAPGAGPLQLSPASPLTDQPASSQDCSEDEEDEEIDVDD*