Part of scaffold_758 (Scaffold)

For more information consult the page for scaffold_758 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DPCD ENSTTRG00000014929 (Bottlenosed dolphin)

Gene Details

deleted in primary ciliary dyskinesia homolog (mouse)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014148, Bottlenosed dolphin)

Protein Percentage 96.2%
cDNA percentage 96.62%
Ka/Ks Ratio 0.27166 (Ka = 0.0224, Ks = 0.0824)

DPCD ENSBTAG00000003578 (Cow)

Gene Details

Protein DPCD

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004655, Cow)

Protein Percentage 92.78%
cDNA percentage 92.96%
Ka/Ks Ratio 0.14533 (Ka = 0.0349, Ks = 0.2398)

DPCD  (Minke Whale)

Gene Details

deleted in primary ciliary dyskinesia homolog (mouse)

External Links

Gene match (Identifier: BACU020265, Minke Whale)

Protein Percentage 98.73%
cDNA percentage 98.52%
Ka/Ks Ratio 0.23228 (Ka = 0.0085, Ks = 0.0367)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 543 bp    Location:377318..397032   Strand:+
>bmy_12652
ATGGCGGTGACGGGTTGGCTGGAGAGTCTGCGGGCGGCAGAGAAGACGGCGCTGCTGCAGGACGGGAGAAGGAAGGTGCACTATTTGTTCCCAGATGGGAAGGAAATGGCCGAAGAATATGATGAGAAGACAAGTGAACTACTTGTGAGGAAATGGCGTGTGAAGAGTGCCCTGGGCGCCTTGGGCCAGTGGCAGATTGAGCCCATCTTCATGCGCAAGGACACCAAGATGAGTTTCCAGTGGCGAATTCGAAACCTCCCGTACCCTAAGGATGTCTACAGTGTCTGTGTGGACCAGAAGGAGCGCTGTGTTGTCGTCAGAACAACCAACAAAAAGTACTACAAGAAGTTCGCAATACCTGACCTAGACAGATATCAGCTACCTCTGGATGATTCCTCGCTGAGCTCTGCTCATGCCAACTGCACCCTCGTCATCTCTTACCAGAAGCCAAAGGAGGTCCTAGTAGCTGAGTCAGAGCTGCAGAAGGAGCTGAAGAAGGTAAAGACGGCCCACAGCAGTGATGGGGACTGCAAGACTCAGTAG

Related Sequences

bmy_12652T0 Protein

Length: 181 aa      View alignments
>bmy_12652T0
MAVTGWLESLRAAEKTALLQDGRRKVHYLFPDGKEMAEEYDEKTSELLVRKWRVKSALGALGQWQIEPIFMRKDTKMSFQWRIRNLPYPKDVYSVCVDQKERCVVVRTTNKKYYKKFAIPDLDRYQLPLDDSSLSSAHANCTLVISYQKPKEVLVAESELQKELKKVKTAHSSDGDCKTQ*