Sequence detailsbmy_12660 (Coding sequence)

Part of scaffold_758 (SequenceType object (1))

For more information consult the page for scaffold_758 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HPS6ENSBTAG00000021942 (Cow)

Gene Details

Hermansky-Pudlak syndrome 6 protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000029250, Cow)

Protein Percentage 92.51%
cDNA percentage 93.67%
Ka/Ks Ratio 0.34011 (Ka = 0.0418, Ks = 0.1228)

Additional orthologs identified in other species via the OPTIC pipeline.

HPS6 (Human)   Hps6 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2412 bp    Location:784435..786846   Strand:+
Raw sequence 
>bmy_12660
ATGAAGCGTGCGGGAACTCTGCGCCTGCTCTCGGACCTGAACAACTTCAGCGGCGCGGCCCGGCTCCGGGAGTTGTTGGCCGGGGACCCAGCCGTCCGAGTTCGCTGCAGCCCGGACGGCCGCCACCTGCTGCTGCTGCGACCTCCGGGGGCACCGGACCCGCAACTGCTGGTCGCGGTGCGTGGACCCGGCGCGGAACTGGAACGTGCCTGGCCGGCTGGCCAGCCCTCACCGCTAGACGCCTTCTTCCTACCGTGGCCGGCGCGACCGGCGCTAGTCCTAGTGTGGGAGAGTGGCCTAGCCGAGGTGTGGGGCGCGGGGGTGGGGCCCGGCTGGCGGCTGCTGCAGAGCACCGAGCTGTGTCCTGGCGGTGGAGCCCGTGTGGTGGCCGTGGCGGCGCCCCGAGGCCGCCTGGTGTGGTGCGAGGAGCGTCAGGCCGGCGCTGAGGGCCGCGAAGGGCCTCCCGCAGTGGCTTTCAGCCACTGTGTGTGCGTCCGGACCCTGGAGCCCAGCGGGGAGGCCGGCACCAACCTGGGCCGTACACACATCCTGCTGCACAACTGCCCCCCTTTCGGGCTTCTGACCTCCCGCAAGGACCTCTTCCTGGTGCCCACTGCCACCACCTGGCCTGGCGTGGGCCACATTCTGCTCATCTGGAGCCCACGCAAGGGCAARGTGGTGGTGGCTGCCCCATGTCTTGGCCTCTCCCACAGTAAAAGCCTGAATCCTGGAGGAGGGGACCCATGGGACTTCAGGACCCTGCTCCGAGGCCTTCCTGGGCTGCTGTCCCCCAGGCAGCCATTAACTGTGCACACCTGGGCCCCAACTCCCCAGGGCCTGCTGTGGCTTGACTTCAGGGGCACTGTGAGCCTGGTGCAGCCCCACGGTGGTACCCGGGCTGTTGGCACCCTTCAGGAGGCACCTGCCAGCCTGGCAGGGTCTGCAGCACTGGGCACATTTCATGGCACTCTGGCCTGTGTGCTGGGCTCCACATTGGAACTGCTGGACATGGGCAGTGGGCAGCTGCTAGAAAGGAAGGTCCTAAGTACAGACCGAGTACATCTGCTGGAACCCCCAGCCCCTGGCATGGAAAATGAGGAAGAGCTGGAGACCCAAGGGGGTCTTCGTTTGCTTTCAGCCGTGGGTCTGTTTCGAGTAGGCTGGGAAGCCCCACAAGGCCTTGAGCTGCCTTCAGCTGAAGATCTGGTGTTTGAGGAGGCCTGCGAGTACTACCAGCGGCGGAGCCTGCGGGGTGCCCGGCTCACCCCAGAGGAACTGAGACACAACAGCACATTCCGGGCACCTCAGGCCCTGGCTTCCATCCTCCAGGGCCACGTGTCCCCATCAACACTGTTGACCACACTGAGGGCTGAGCTTCGGGATTACCGGGGCTTAGAGCAGCTTAAAGCCCAGCTGGTGGCTGGGGATGATGAGGAGGCTGGCTGGACTGAGCTGGCAGAGCACGAAGTGGCACGGCTGCTGAGGACTGAGTTGATGGGAGACCAGCTGGCCCAGCTCAACACCATCTTCCAAGCCCTCCCTACAGCAGCCTGGGGTGCCATCCTCAGGGCCCTGCAGCTCCAGCCAGATGGGAATGGCAGGCTGAGGTCCCAAGCTCCCCCTGACGTGTGGAAGAAGGTACTTGGGGTTACAACATGTGGAAAGGAACCACCCAGTGGGATACTGCCCCTCTTTGAACTCCTGTGCCGATGCCTCTGCCGGCTGGAGCCACGGTGGCTGCCACCCTTTGTGGAGCTGGCACAGCAGCAGGGCGGGCCTGGCTGGGGGTCAGGGGGCCCAGGGCTGCCCCTCTATCGCCGAGCCCTGGAAGTACTAGGTGAGGAGGGGACTAGGCCTGAAGCACTGGAGCTAGACCTGCTCTTGGGCAGTGGGCGGCCCAAAGCTGTGCTCCAAGCTGTGGGGCAGCTGGTGCAAAAGGAAGAGTGGGAGCGGGCTCTAGAGGCTGGCTTGGCCCTCAGCCCCTCCAGCCCCCTGCTTCGAAGTGAGATCTTCAAACTGCTGTTGGCCGAATTTGCCCGGCACCGCCGGCTTGATGCTCACCTCCCCCTCCTTTGCCGCCTGTGCCCACCAGACCTAGCTCCAGCTGAGCTCCTGCTTCTACTGCGGACACACCTCCCAGATGAGTTGGAGCCCCCCGCCCCATTCCCTGAGCCTGGGGCAGAGCCCCCTCTCACTGTGGGCTTGCTCAGAGCCCTGCTGGAGCAGACTGGGACTCAAGGACGACCCTCTGGCCCAGTTCTAAGCCGATATGAGGACATTCTATGGGACCCAGGCACTCCACCCCCTACCCCACCTCGGGGACCTATGTCAGCCCTCCAGGCATCAGACCACCCAGGCCTGGAGGCATGGGCACCATCTGGACAGGGCCTCTGTGTGACTGACACAGGCTGA

Related Sequences

bmy_12660T0 SequenceType object (3)

Length: 804 aa      View alignments
>bmy_12660T0
MKRAGTLRLLSDLNNFSGAARLRELLAGDPAVRVRCSPDGRHLLLLRPPGAPDPQLLVAVRGPGAELERAWPAGQPSPLDAFFLPWPARPALVLVWESGLAEVWGAGVGPGWRLLQSTELCPGGGARVVAVAAPRGRLVWCEERQAGAEGREGPPAVAFSHCVCVRTLEPSGEAGTNLGRTHILLHNCPPFGLLTSRKDLFLVPTATTWPGVGHILLIWSPRKGKVVVAAPCLGLSHSKSLNPGGGDPWDFRTLLRGLPGLLSPRQPLTVHTWAPTPQGLLWLDFRGTVSLVQPHGGTRAVGTLQEAPASLAGSAALGTFHGTLACVLGSTLELLDMGSGQLLERKVLSTDRVHLLEPPAPGMENEEELETQGGLRLLSAVGLFRVGWEAPQGLELPSAEDLVFEEACEYYQRRSLRGARLTPEELRHNSTFRAPQALASILQGHVSPSTLLTTLRAELRDYRGLEQLKAQLVAGDDEEAGWTELAEHEVARLLRTELMGDQLAQLNTIFQALPTAAWGAILRALQLQPDGNGRLRSQAPPDVWKKVLGVTTCGKEPPSGILPLFELLCRCLCRLEPRWLPPFVELAQQQGGPGWGSGGPGLPLYRRALEVLGEEGTRPEALELDLLLGSGRPKAVLQAVGQLVQKEEWERALEAGLALSPSSPLLRSEIFKLLLAEFARHRRLDAHLPLLCRLCPPDLAPAELLLLLRTHLPDELEPPAPFPEPGAEPPLTVGLLRALLEQTGTQGRPSGPVLSRYEDILWDPGTPPPTPPRGPMSALQASDHPGLEAWAPSGQGLCVTDTG*