Part of scaffold_783 (Scaffold)

For more information consult the page for scaffold_783 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CTDSPL2 ENSTTRG00000015222 (Bottlenosed dolphin)

Gene Details

CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014429, Bottlenosed dolphin)

Protein Percentage 74.38%
cDNA percentage 74.38%
Ka/Ks Ratio 0.17938 (Ka = 0.0082, Ks = 0.0456)

CTDSPL2 ENSBTAG00000015385 (Cow)

Gene Details

CTD small phosphatase-like protein 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020446, Cow)

Protein Percentage 99.3%
cDNA percentage 97.32%
Ka/Ks Ratio 0.02805 (Ka = 0.0031, Ks = 0.1102)

CTDSPL2  (Minke Whale)

Gene Details

CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2

External Links

Gene match (Identifier: BACU016946, Minke Whale)

Protein Percentage 93.21%
cDNA percentage 93.21%
Ka/Ks Ratio 0.28713 (Ka = 0.0484, Ks = 0.1687)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 861 bp    Location:600204..574847   Strand:-
>bmy_12691
ATGGAACAGGTGGATGAGATCACTACCAGTACTACTACATCAACTAATGGAGCAGCTTACTCAAATCAAGCAGTTCAAGTGAGGTCATCAATAAATAATGGTTTAGAAGAAGCAGAAGAAACAGTTAATCGTGATATCCCACCCCTTACAGCACCAGTAACTCCAGATAGTGGTTATTCATCAGCCCACGCAGAGGCCACCTATGAAGAAGACTGGGAAGTATTTGACCCCTATTATTTCATCAAACATGTTCCACCACTGACAGAAGAACAACTAAATAGGAAACCTGCCCTTCCATTGAAGACAAGAAGCACACCAGAATTCTCCCTAGTTTTAGACTTGGATGAAACACTAGTACACTGTAGTTTAAATGAGCTAGAAGATGCAGCACTTACGTTTCCAGTCCTTTTCCAAGATGTCATTTATCAGGTTTACGTGAGATTAAGACCGTTCTTCAGGGAATTCCTGGAACGAATGTCTCAGATGTATGAGATCATTCTTTTTACTGCTTCTAAGAAGGTGTATGCAGACAAGTTACTGAACATACTAGACCCTAAAAAGCAACTGGTCAGGCACCGGCTTTTCCGCGAACATTGTGTTTGTGTACAAGGAAACTATATAAAGGACTTAAATATCCTTGGAAGAGATCTTTCAAAAACTATAATAATTGACAACTCACCACAAGCCTTTGCATATCAGCTATCTAATGGAATCCCTATAGAAAGCTGGTTTATGGATAAAAATGACAATGAACTTCTAAAATTGATTCCATTTCTGGAGAAGCTAGTAGAACTGAATGAAGATGTTCGACCTCACATCAGAGACCGATTTCGCTTGCATGATTTGCTGCCCCCAGATTAA

Related Sequences

bmy_12691T0 Protein

Length: 287 aa      View alignments
>bmy_12691T0
MEQVDEITTSTTTSTNGAAYSNQAVQVRSSINNGLEEAEETVNRDIPPLTAPVTPDSGYSSAHAEATYEEDWEVFDPYYFIKHVPPLTEEQLNRKPALPLKTRSTPEFSLVLDLDETLVHCSLNELEDAALTFPVLFQDVIYQVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKKQLVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKNDNELLKLIPFLEKLVELNEDVRPHIRDRFRLHDLLPPD*