Part of scaffold_789 (SequenceType object (1))

For more information consult the page for scaffold_789 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PTPLAD1ENSTTRG00000011863 (Bottlenosed dolphin)

Gene Details

protein tyrosine phosphatase-like A domain containing 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011252, Bottlenosed dolphin)

Protein Percentage 90.88%
cDNA percentage 90.77%
Ka/Ks Ratio 0.22916 (Ka = 0.0039, Ks = 0.0171)

PTPLAD1ENSBTAG00000015155 (Cow)

Gene Details

3-hydroxyacyl-CoA dehydratase 3

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000036401, Cow)

Protein Percentage 94.14%
cDNA percentage 95.22%
Ka/Ks Ratio 0.33358 (Ka = 0.0289, Ks = 0.0868)

PTPLAD1 (Minke Whale)

Gene Details

protein tyrosine phosphatase-like A domain containing 1

External Links

Gene match (Identifier: BACU001070, Minke Whale)

Protein Percentage 99.35%
cDNA percentage 99.24%
Ka/Ks Ratio 0.29388 (Ka = 0.0018, Ks = 0.0061)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 924 bp    Location:344946..312760   Strand:-
>bmy_12699
ATGGAGAATCAGGTGCTGACGCCGCACGTCTACTGGGCTCAGCGGCACCGCGAGCTGTATCTGCGCGTGGAACTGAGTGACGTGCAGAATCCTGCCATCAGCATCACTGAAAATGTGCTGCATTTCAAAGCTCAGGGGCATGGTGCCAAAGGAGACAATGTTTATGGATTTCACCTGGAGTTCTTAGACCTTGTGAAGCCAGAGCTGGTTTACAAACTGACCCAGAGRCAGGTGAACATCACGGTACAGAAGAAGGTGAGCCAGTGGTGGGAGAGACTCACCAAGCAGGAGAAGCGCCCACTGTTTTTGGCCCCTGACTTTGATCGTTGGCTGGATGAGTCTGATGCTGAAATGGAGCTCAGAGCCAAGTCCTTCTATGACACGTTCCACACCGTGGCTGACATGATGTATTTCTGCCAGATGCTGGCAGTTGTGGAAGCTATCAATGCAGCAATTGGAGTCACTAAGTCATCAGTGATACCTTCTCTTTTCCAGCTTCTTGGAAGAAACTTCATTTTGTTTATCGTCTTTGGCACCATGGAAGAAATGCAAAACAAAGCTGTGGTTTTCTTTGTGTTTTATGTRTGGAGCACAGCTGAAATTTTGAGGTACCCCTTCTACATGCTTTCCTGCATTGACATGGATTGGAAGGTGCTCACATGGCTTCGTTACACTATGTGGATTCCCCTATATCCTCTGGGATGTTTGGCAGAAGCCGTCTCAGTGATCCAGTCCATTCCAATATTTAATGAAACAGGAAGATTCAGCTTCACATTGCCATATCCAGTGAAAATCAAAGTTAGATTTTCCTTTTTTCTTCAGATTTATCTTATAATATTATTTTTAGGATTATACATAAATTTCCGTCATCTTTATAAACAGCGCAGGCGGCGCTTTGGACAAAAAAAGAAAAAGATCCAYTAA

Related Sequences

bmy_12699T0 SequenceType object (3)

Length: 308 aa      View alignments
>bmy_12699T0
MENQVLTPHVYWAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYGFHLEFLDLVKPELVYKLTQRQVNITVQKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEMELRAKSFYDTFHTVADMMYFCQMLAVVEAINAAIGVTKSSVIPSLFQLLGRNFILFIVFGTMEEMQNKAVVFFVFYVWSTAEILRYPFYMLSCIDMDWKVLTWLRYTMWIPLYPLGCLAEAVSVIQSIPIFNETGRFSFTLPYPVKIKVRFSFFLQIYLIILFLGLYINFRHLYKQRRRRFGQKKKKIH*