Sequence details bmy_12701 (Coding sequence)

Part of scaffold_789 (Scaffold)

For more information consult the page for scaffold_789 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

IGDCC4 ENSTTRG00000011838 (Bottlenosed dolphin)

Gene Details

immunoglobulin superfamily, DCC subclass, member 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011237, Bottlenosed dolphin)

Protein Percentage 85.48%
cDNA percentage 85.99%
Ka/Ks Ratio 0.30177 (Ka = 0.0334, Ks = 0.1106)

IGDCC4 ENSBTAG00000006440 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008442, Cow)

Protein Percentage 91.73%
cDNA percentage 91.43%
Ka/Ks Ratio 0.16097 (Ka = 0.0442, Ks = 0.2748)

IGDCC4  (Minke Whale)

Gene Details

immunoglobulin superfamily, DCC subclass, member 4

External Links

Gene match (Identifier: BACU001068, Minke Whale)

Protein Percentage 95.31%
cDNA percentage 95.83%
Ka/Ks Ratio 0.34912 (Ka = 0.0297, Ks = 0.085)

Additional orthologs identified in other species via the OPTIC pipeline.

IGDCC4 (Human)   Igdcc4 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3339 bp    Location:439257..467140   Strand:+
Raw sequence 
>bmy_12701
GAGCAGCCGTTGCCCCGGAAGACGACCGTGTCACTGAGCTGTGGAGCAGGGCCGCTGCAAGTGATCCTGGGCCCGGAGCAAGCCACGGTGCTGGACTGCGGTCTGGGGGCGGCTACTGCAGGACACCCCCCCAGCGTCACGTGGAGCAAGGATGGAGGCATCCTGCCCGAGCACAACCACCTTCGCCTGCTACCCAATGGCTCCCTGTGGCTGTCCCAGCTGCCAGCTCCCGACGGCACTGACCCTGGGGCTTCAGAGGTCATTGAGGGCAGCTATTCCTGCCTGGCCCGCAGCCCCGTTGGAGTGGTGGCCAGCCAGGCTGCGGTGGTCAAGCTTGCCACACTTGCAGGCTTCTCCCTGCACCCGCAGTCTCAGACGGTGGAGGAGAACGGGACCGCTCGGTTTCAGTGCCACATCAAAGGGCTGCCAGCACCTGTCATTACTTGGGAGAAGGACCAGGTGACGGTGCCTGAGGAGCCTCGGCTCATCACCCTTCCCAATGGGGTCCTCCAGATCCTGGACGTTCAGGAAGGTGACGCAGGCTCCTACCGCTGCGTGGCCACCAACTCAGCAAACCAGCGCTTCAGTCAGGAGGCCCTACTCCGCGACGTGGTCATTGTGGCAGCCCCGGAGAACACCACCGTGGTGTCTGGCCAGAGTGTGGTGATGGAGTGTGTGGCCTCTGCTGACCCCACCCCTTTCGTGTCCTGGGTCCGACAGGATGGGAAGCCCATCTCCACCGATGTCATCGTCCTGGGCCGCACCAACCTACTAATCACCAGCGCGCAGCCCCGGCACTCTGGCGTCTACGTCTGCCGAGCTAACAAGCCCCGCACGCGCGACTTCGCAACCGCAGCCGCAGAGCTCCGCGTGCTGGGTGAGGAGGGGAGGAGGGCGCCGGAGGCGCTGTCGCGGACGCGGGCGAGCACCGCGCGCTTCGTGTGCCGCGCGTCCGGGGAGCCGCGGCCCACGCTGCGCTGGCTGCACGACGGAGCGCCGCTGCGGCCCAACGGGCGCGTCAAGGTGCAGGGCGGCGGAGGCAGCCTGGTCATCACGCAGATCGGCCTGCAGGACGCCGGCTACTATCAGTGCGTGGCCGAGAATGGCGCGGGCACGGCGTGCGCCGCCGCGCCTCTGGCAGTAGTGGTGCGAGAGGGGCTGCCCAGCGCCCCCACGCGGGTCACCGCCACGCCGCTGAGCAGCTCCGCTGTTCTGGTGGCCTGGGAGCGGCCTGAGCTGCACAGCGAGCAGATCATCGGCTTCTCCCTCCACTACCAGAAGGCACGGGGCATGGACAATGTGGAATACCAGTTTGCAGTGAACAATGACACCACTGAGCTACAGGTTCGGGACCTGGAACCCAACACAGACTACGAGTTCTACGTGGTGGCCTACTCGCAGCTGGGCGCCAGCCGCACCTCCACCCCAGCACTGGTCCACACACTGGATGATGCAGATCAGATTTTCTCCACCGAGGTGCCAGGGAACGAGACACAGTTTACACTGAACTCGCTTCAGCCCAACAAGGTGTATCGAGTGCGGATTTCGGCCGGCACAGGGACGGGCTATGGGGCCCCCTCCCAGTGGATGCAGCACAGGACGCCCAGTGTGCACAACCAGAGCCACGAGCTGAAGGTACGGGCAAGGATGGAGTCCCTGGTCGTATCATGGCAGCCACCCCCTCACCCCGCTCAGATCTCTGGCTACAAACTGTACTGGCGAGAGGTGGGGACAGAGGAGGAGGAGGCAGATGGCGAGAGCCCTCCAGGGGGCCGTGGAGACCAGGCTTGGGATGTGGGGCCTGTCCGGCTCAAGAAGAAAGTGAAGCAGTATGAGCTGACCCAGCTAGTCCCTGGCCAGCTGTACGAGGTGAAGCTCKTGGCATTCAACAAACACGAGGATGGCTATGCGGCAGTGTGGAAGGGCAAGACGGAAAAGGCTCCCACCCCAGGTGAGGGGGCTGGGGAAGCGGGGGAGGAGGTCTCAGTCAGCAGCTCTGGAGAAGACATCCTCATTGGCGGGCTGAAGCCATTCACCAAATATGAGTTTGCGGTACAGTCCCACGGCGTGGACATGGACGGGCCTTTCGGCTCCGTAGTGGAGCGCTCCACCCTGCCTGACCGGCCCTCCACGCCCCCATCCGACCTGCGCCTGAGGCCCCTGACGCCATCCACCGTTCGGCTGCACTGGTGCCCCCCGTCGGAGCCCAACGGCGAGATTGTGGAGTATCTGATTCTCTACAGCAACAACCGTACCCAGCCTGAGCACCAGTGGACCCTGCTCACCACCGAGGGAAACATCTTCAGTGCTGAGGTCCACGGCCTCGAGAGCGACACTAGGTACTTCTTCAAGATGGGGGCGCGCACGGAGGTGGGGCCTGGGCCCTTCTCTGGCCTGCAGGATGTGATTACTCTCCAGGAAAAGCTCTCAGACTCTTTGGATGTGCACTCTGTCACGGGCATCATCGTGGGCGTCTGCCTGGGCCTCCTCTGCCTCCTGGCCTGCATGTGCGCTGGCCTGCGCCGTGGCCCCCACCGGGAAGCCCTCCCGGGCCTGTCCTCCACGGCCACTGCTGGGAACCCCACGCTGTACTCCCGAGCCCGCCTTGCCCCCCCCAGCCCCCCGGCTGCCCATGAACTGGAGTCCCTTGTGCACCCCCGTCCCCAGGATTGGTCCCCACCACCCTCAGACATCGAGGACAGGGCTGAAGTGCACAGCCTTATGGGTGGTGCCGGTCCTGACTGCCGGGGTCACTCCAAGAGAAAGATCTCCTGGGCTCAGCACGGTGGGCCGAGCTGGGCAGGTTCTTGGGCAGGCTGTGAGCTGCCCCAGGCAGGCCCCATGCCCTCTCTGACCCGGGCCCTGCTGCCCCCTGCTGGAACCGGGCAGACGCTGTTGCTGCAGGCTCTGGTGTACGATGCCATAAAGGGCAATGGGAGGAAGAAGCCGCCCCCAGCCTGCAGGAACCAGGTGGAGGCCGAAGTCATTGTCCACTCTGACTTCAGTGCATCCAAAGGGAACCCTGACCTCCACCTCCAAGACCTGGAACCTGAGGATCCGCTGCCTTCAGAGGCTGCTGACCTCACTTTGGGTGTTATGGATCTCAGGCAAGGGGCAGACTGGCTGGACAGGGAGCTGGGAGGGTGTGAGCAGGCAAGCCCCGGGCCAGACAGACTCACCTGCCTGCCAGAGGCAGCCAGTGCCTCTTGCCCCTACCCGGACCTCCAGCCCAGTGAGGCTCTGGAGGAGGCCCCAGGGAACAGCTGCCAGCCAAAGGCCCCCTGCCCTCCAGCAGCCAGCCCAGGCCTGCCCAGAGCCCCAGTCTCCTCCTCTGCTTAG

Related Sequences

bmy_12701T0 Protein

Length: 1113 aa      View alignments
>bmy_12701T0
EQPLPRKTTVSLSCGAGPLQVILGPEQATVLDCGLGAATAGHPPSVTWSKDGGILPEHNHLRLLPNGSLWLSQLPAPDGTDPGASEVIEGSYSCLARSPVGVVASQAAVVKLATLAGFSLHPQSQTVEENGTARFQCHIKGLPAPVITWEKDQVTVPEEPRLITLPNGVLQILDVQEGDAGSYRCVATNSANQRFSQEALLRDVVIVAAPENTTVVSGQSVVMECVASADPTPFVSWVRQDGKPISTDVIVLGRTNLLITSAQPRHSGVYVCRANKPRTRDFATAAAELRVLGEEGRRAPEALSRTRASTARFVCRASGEPRPTLRWLHDGAPLRPNGRVKVQGGGGSLVITQIGLQDAGYYQCVAENGAGTACAAAPLAVVVREGLPSAPTRVTATPLSSSAVLVAWERPELHSEQIIGFSLHYQKARGMDNVEYQFAVNNDTTELQVRDLEPNTDYEFYVVAYSQLGASRTSTPALVHTLDDADQIFSTEVPGNETQFTLNSLQPNKVYRVRISAGTGTGYGAPSQWMQHRTPSVHNQSHELKVRARMESLVVSWQPPPHPAQISGYKLYWREVGTEEEEADGESPPGGRGDQAWDVGPVRLKKKVKQYELTQLVPGQLYEVKLXAFNKHEDGYAAVWKGKTEKAPTPGEGAGEAGEEVSVSSSGEDILIGGLKPFTKYEFAVQSHGVDMDGPFGSVVERSTLPDRPSTPPSDLRLRPLTPSTVRLHWCPPSEPNGEIVEYLILYSNNRTQPEHQWTLLTTEGNIFSAEVHGLESDTRYFFKMGARTEVGPGPFSGLQDVITLQEKLSDSLDVHSVTGIIVGVCLGLLCLLACMCAGLRRGPHREALPGLSSTATAGNPTLYSRARLAPPSPPAAHELESLVHPRPQDWSPPPSDIEDRAEVHSLMGGAGPDCRGHSKRKISWAQHGGPSWAGSWAGCELPQAGPMPSLTRALLPPAGTGQTLLLQALVYDAIKGNGRKKPPPACRNQVEAEVIVHSDFSASKGNPDLHLQDLEPEDPLPSEAADLTLGVMDLRQGADWLDRELGGCEQASPGPDRLTCLPEAASASCPYPDLQPSEALEEAPGNSCQPKAPCPPAASPGLPRAPVSSSA*