Sequence details bmy_12705 (Coding sequence)

Part of scaffold_789 (Scaffold)

For more information consult the page for scaffold_789 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CILP ENSTTRG00000005000 (Bottlenosed dolphin)

Gene Details

cartilage intermediate layer protein, nucleotide pyrophosphohydrolase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004712, Bottlenosed dolphin)

Protein Percentage 86.97%
cDNA percentage 87.83%
Ka/Ks Ratio 0.24729 (Ka = 0.0133, Ks = 0.0538)

CILP ENSBTAG00000002821 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003651, Cow)

Protein Percentage 91.64%
cDNA percentage 92.89%
Ka/Ks Ratio 0.19502 (Ka = 0.0401, Ks = 0.2055)

CILP  (Minke Whale)

Gene Details

cartilage intermediate layer protein, nucleotide pyrophosphohydrolase

External Links

Gene match (Identifier: BACU001066, Minke Whale)

Protein Percentage 97.06%
cDNA percentage 97.69%
Ka/Ks Ratio 0.33352 (Ka = 0.0167, Ks = 0.0501)

Additional orthologs identified in other species via the OPTIC pipeline.

CILP (Human)   Cilp (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3486 bp    Location:619396..630704   Strand:+
Raw sequence 
>bmy_12705
ATGATGCTCACTCAGTCGGTGAGAAGAGTCCAGCCTGGGAAGAGGACCTCAGGCATCTTTGCCAAGCCTGCTGACCCCCTGGACAGTCCTGGGGAGTGGACAACGTGGTTCAACATCGACCACCCAGGTGGGCGGGGCGACTACGAGCGGCTGGATGCCATTCACTTCTACTACGGGGACCGGGTGTGTCCTCGGCCCCTGCGGCTAGAGGCTTGGACCACCGACTGGATACCCGCAGGCAGCACTGGCCAAGTGGTCCATGGCAACCCCCTTGAGGGCTTCTGGTGCCTCAACAGGGAGCAGCGGCCTGGCCAGAACTGCTCCAATTATACCGTGCGCTTCCTCTGCCCGCCAGGATCCCTGCGCCAAGACACAGAGCACAGCCTCTGGAGCCCGTGGTCTCCCTGGAGCAAGTGTTCTGCTGCTTGTGGTCACCCTGGGGTCCAGACCCGAACACGCACCTGCTTGGCGGAGACGGTGTCACTGTGCAATGATGCCACCGAGGAGGGTCGGCTCTGCATGGAGCAGGCCTGTTCAGCCTGTGACCTGACCTGCCCCATGGGCCAGGTGAATGCTGACTGTGACGCCTGCATGTGCCAGGACTTCGTGCTGTATGGGGCTCTCTCCCTCCCTGGGGGTGCCCCAGCCTCAGGGGCTACTGTCTACGTCCTGACCAAAACACCTAAGCTATTGACCCAGACGGACAGCAGCGGGAGGTTCCGAGTCCCTGGCTTGTGCCCCGATGGCAAAAGCATCCTGAAGATCACAAAGACCAAGTTTGCCCCTATCAGGCTCACAATGCCTAAGACTAGACTGAAGGCAGCCACCATCAAGGCGGAGTTCATGAGGGCAGAGACTCCATACATTGTGATGAACCCCAAGACAAAAGCACGGAGAGCTGGGCAGAGTGTGTCCCTGTGCTGTAAGGCCACGGGGAAGCCCAAACCAGACAAGTATTTCTGGTACCATAACAGCACACTGTTGGACCCCTCCCTCTACAAACATGAGAGCAAGCTGGTGCTGAGGAACCTGCAGCGGGACCAGGCCGGGGAGTACTTCTGCAAGGCCCAGAGTGACGCTGGGGCTGCAAAGTCCCATGTCGCCCGGCTGACTGTCATAGCCCCCGATGAGACTCCTTGCAACCCAACCCCCGAGAGCTACCTTATCCAGCTGCCCCATGATTGTTTCCAGAATGCCACCAACTCCTTCTACTATGATGTGGGTCATTGCCCTGTCAAGACCTGTGCAGGGCAGCAGGATAATGGGATCAGGTGCCAGGATGCTGTGGAGAACTGCTGTGGGATCTCCAAAACAGAGGAGAGGGAGATCCAGTGCAGTGGGTACACGCTGCCCACGAAGGTGGCCACGGAGTGCAGCTGCCAGCGGTGTACGGAGACCCAGACTATCGTGCGGGGACGCGTCAGCGCCTCTGACAATGGGGAACCCATGCGCTTTGGCCACGTGTACATGGGGAACAGCCGTGTGAGCATGACTGGCTACAAGGGCACGTTCACCCTCCACGTCCCTCAGGACACTGAGAGGCTGGTGCTCACATTTGTGGACAGGCTGCAGAAGTTTGTCAACACCACCAAAGTGCTGCCCTTCAATAAGAAGGGGAGTGCGGTGTTCCAAGAGATCAAGATGCTTCGGTGGAAAGAGCCCATCACCTTGGAGGCCATGGAGACCAACATTATCCCCTTGGGGGATATGGCTGGTGAAGATCCTGTGGCTGAGCTGGAGATCCCATCCAAGAGTTTCTACCGGCAGAACGGGGAGCCCTACACAGGAAAAGTGAAGGCCAGTGTGACCTTCCTGGATCCCCGGAATATTTCCACAGCTACTGCTGCCCAGAGTGACCTGAACTTCATCAATGATGAAGGAGACATCTTCCCCCTTCGGACATACGGCATGTTCTCTGTGGACTTCACAGATGAGGCCACCTCAGRGTCACTTAATGTTGGCAAGGTGAAGGTCCACCTCGACTCAACCCAGGTCAAGATGCCAGAGCACTTGCCCATGATGAAACTCTGGTCACTCAACCCAGGCACAGGGCTGTGGGAGGAGGAAGGTGACTTCAAATTTGAAAGCCAAAGGCGGAACAGAAGGGAAGACAGGACCTTCCTGGTGGGCAACATGGAGATCCGGGAGAGGAGGCTCTTTAACCTGGATGTCCCTGAAAGCAGRAGGTGCTTCATCAAGGTGAGGGCCTACCGAAGTGAGAGGTTCTTGCCCAGTGAGCAGATGCAGGGTGTCGTGGTCTCTGTGATCAACCTGGAGCCCAGGCCTGGCTTCTCCTCCAACCCCAGGGCCTGGGGCCGCTTTGACAGTGTCATCACTGGCCCCAATGGGGCCTGTCTGCCTGCCTTCTGCGATGACCAGTCCCCTGATGCTTACTCTGCCTACGTCTTAGCCAGCCTGGCTGGGGAAGAACTGGAAGCAGTGGAGTCCTCTCCTAAATTCAACCCAAATGCAATTGGTGTCCCTCAGCCCTACCTCAACAAGCTCAAGTACCGCCGGACAGACCATGAGGACCCACAGGTCAAGAAGACAGCTTTCCAGATCAGCATGGCCAAGCCAAGGCCCAACTCAGCTGAGGAGAGCAATGGACCCATCTATGCATTTGAGAACCTCCAGGCATGCGAGGAAGTACCTCCCAGTGCGGCCCACTTCCGGTTCTACCAGATTGAGGGGGATCGATATGACTACAACACGGTCCCTTTCAACGAGGATGACCCCATGAGCTGGACTGAAGACTACCTGGCATGGTGGCCCAAGCCAATGGAGTTCAGGGCCTGCTATATCAAGGTGAAGATCATGGGGCCACTGGAGGTGAACGTGCGATCCCGTAACATGGGGGGCACCCACCGGCAGACAGTGGGAAAGCTGTACGGAATCCGGGATGTGAAGAGCACGCGGGACAGGGACCAGCCCAATGTCTCAGCTGCCTGTTTGGAGTTCAAGTGCAGTGGGATGCTCTATGACCAGGACCGTGTAGACCGCACGCTGGTGAAGGTTATCCCCCAGGGCAGCTGCCATCGAGTCAGCGTAAACTCCATGCTGCATGAGTACCTGGTCAACCACCTACCACTGCCGGTCAACAACGACACCAGTGAGTACACCATGCTGGCGCCCTTGGACCCACTGGGCCACAACTATGGCATCTACACTGTCACTGACCAGGACCCTCGCACGGCCAAGGAGATTGCGCTTGGCCGGTGCTTTGATGGCACATCTGATGGCTCCTCCAGAGTCATGAAGAGCAATGTGGGAGTGGCCCTGACCTTTAACTGCGTAGAGAGGCAGGTGGGCCGTCAGAGTGCCTTCCAGTACCTCCAAAGCATCCCGGCCCGGCCCTCCCCCGCAAGCACTGTCAGGGGGAGAGCGCCCTCAAGGAGGCAGCGGGCAAGTCAGGGTGGCCAGCGCCGACGCAGAGGGGCGGCCTCTCTGAGGGTTTCTGGGGTTGCTCAGCAGCCTCTGAGCAACTAA

Related Sequences

bmy_12705T0 Protein

Length: 1162 aa      View alignments
>bmy_12705T0
MMLTQSVRRVQPGKRTSGIFAKPADPLDSPGEWTTWFNIDHPGGRGDYERLDAIHFYYGDRVCPRPLRLEAWTTDWIPAGSTGQVVHGNPLEGFWCLNREQRPGQNCSNYTVRFLCPPGSLRQDTEHSLWSPWSPWSKCSAACGHPGVQTRTRTCLAETVSLCNDATEEGRLCMEQACSACDLTCPMGQVNADCDACMCQDFVLYGALSLPGGAPASGATVYVLTKTPKLLTQTDSSGRFRVPGLCPDGKSILKITKTKFAPIRLTMPKTRLKAATIKAEFMRAETPYIVMNPKTKARRAGQSVSLCCKATGKPKPDKYFWYHNSTLLDPSLYKHESKLVLRNLQRDQAGEYFCKAQSDAGAAKSHVARLTVIAPDETPCNPTPESYLIQLPHDCFQNATNSFYYDVGHCPVKTCAGQQDNGIRCQDAVENCCGISKTEEREIQCSGYTLPTKVATECSCQRCTETQTIVRGRVSASDNGEPMRFGHVYMGNSRVSMTGYKGTFTLHVPQDTERLVLTFVDRLQKFVNTTKVLPFNKKGSAVFQEIKMLRWKEPITLEAMETNIIPLGDMAGEDPVAELEIPSKSFYRQNGEPYTGKVKASVTFLDPRNISTATAAQSDLNFINDEGDIFPLRTYGMFSVDFTDEATSXSLNVGKVKVHLDSTQVKMPEHLPMMKLWSLNPGTGLWEEEGDFKFESQRRNRREDRTFLVGNMEIRERRLFNLDVPESRRCFIKVRAYRSERFLPSEQMQGVVVSVINLEPRPGFSSNPRAWGRFDSVITGPNGACLPAFCDDQSPDAYSAYVLASLAGEELEAVESSPKFNPNAIGVPQPYLNKLKYRRTDHEDPQVKKTAFQISMAKPRPNSAEESNGPIYAFENLQACEEVPPSAAHFRFYQIEGDRYDYNTVPFNEDDPMSWTEDYLAWWPKPMEFRACYIKVKIMGPLEVNVRSRNMGGTHRQTVGKLYGIRDVKSTRDRDQPNVSAACLEFKCSGMLYDQDRVDRTLVKVIPQGSCHRVSVNSMLHEYLVNHLPLPVNNDTSEYTMLAPLDPLGHNYGIYTVTDQDPRTAKEIALGRCFDGTSDGSSRVMKSNVGVALTFNCVERQVGRQSAFQYLQSIPARPSPASTVRGRAPSRRQRASQGGQRRRRGAASLRVSGVAQQPLSN*