Part of scaffold_789 (Scaffold)

For more information consult the page for scaffold_789 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CLPX ENSTTRG00000004995 (Bottlenosed dolphin)

Gene Details

ClpX caseinolytic peptidase X homolog (E. coli)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004708, Bottlenosed dolphin)

Protein Percentage 95.82%
cDNA percentage 95.09%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0372)

CLPX ENSBTAG00000008386 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011038, Cow)

Protein Percentage 99.13%
cDNA percentage 96.91%
Ka/Ks Ratio 0.03331 (Ka = 0.004, Ks = 0.1195)

CLPX  (Minke Whale)

Gene Details

caseinolytic mitochondrial matrix peptidase chaperone subunit

External Links

Gene match (Identifier: BACU001065, Minke Whale)

Protein Percentage 99.83%
cDNA percentage 99.39%
Ka/Ks Ratio 0.03643 (Ka = 0.0008, Ks = 0.0212)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1797 bp    Location:651385..687670   Strand:+
>bmy_12706
ATGTCGGGCTGCGGCGCTTGTACTTGCGGCGCCACAGCCGCGCGGCTCATCAGCTCCTCGCTCGCCTCCGCGCCAAGAGGTATTTCTTGTGGTCGCATTCATATACCAGTTTTAGGAAGGCTTGGGACCTTTGAAACTCAGCTTCTACGAAGAGCTCCTTTTAGAGCCTTTACGGAAACACCAGCATACTTTGCTTCAAAAGATGGGATGAGTAAAGATGGCTCTGGAGATGGAAATAAGAAATCAGCAAGTGAGGGAAGCAGTAAGAAGTCAGGCTCTGGGAATTCTGGGAAAGGTGGAAACCAGCTTCGCTGTCCTAAATGTGGCGACTTGTGCACACACGTAGAGACCTTTGTGTCATCCACCCGCTTTGTGAAGTGTGAAAAATGTCATCATTTTTTTGTTGTGCTGTCAGAAGCAGACTCAAAGAAAAGCATTATTAAAGAACCTGAATCAGCAGCAGAAGCTGTAAAATTGGCATTCCAACAGAAACCGCCTCCTCCCCCCAAAAAGATTTATAACTACCTCGACAAGTATGTTGTTGGCCAGTCATTTGCTAAGAAGGTGCTTTCAGTTGCTGTATACAATCATTATAAGAGAATATATAACAATATCCCAGCTAATGTGAGACAGCAAGCAGAAGTTGAGAAGCAGACATCATTAACTCCTAGAGAGTTAGAAATAAGAAGACGGGAGGATGAGTACAGATTTACAAAGTTGCTTCAGATTGCTGGAATTAGTCCACATGGTAATGCTTTAGGAGCATCAATGCAGCAACAAGTAAACCAACAAATACCTCAGGAAAAACGAGGAGGTGAAGTATTGGATTCTTCCCACGATGACATAAAACTTGAAAAGAGTAATATTTTGCTGCTTGGACCAACTGGGTCAGGTAAAACTCTTCTGGCACAAACCCTAGCTAAATGCCTTGATGTCCCTTTTGCTATCTGTGACTGTACGACTTTGACTCAGGCTGGATATGTAGGTGAAGATATTGAATCTGTGATTGCCAAACTGCTCCAAGATGCCAATTATAATGTAGAAAAAGCACAACAAGGAATTGTCTTTCTGGATGAAGTAGATAAGATTGGCAGTGTGCCAGGCATTCATCAGTTACGGGATGTAGGTGGAGAAGGCGTTCAGCAAGGCTTATTAAAACTACTAGAAGGCACAATAGTCAATGTTCCAGAAAAGAATTCTCGTAAGCTACGTGGAGAAACGGTACAAGTTGATACAACAAACATCCTAAGGGCTGCAGCTGCTGCAGACCTTGCCAATCGAAGTGGAGAATCAAATACTCACCAAGACATTGAAGAAAAAGATCGTTTATTACGTCACGTGGAAGCCAGAGATCTCATTGAATTTGGCATGATTCCTGAGTTTGTGGGACGGTTGCCTGTGGTAGTTCCTTTGCATAGCCTAGATGAGAAAACACTTGTACAAATACTAACTGAGCCACGTAATGCTGTTATTCCTCAGTACCAGGCCTTATTCAGCATGGATAAGTGTGAACTGAATGTTACTGAAGATGCTTTGAAAGCTATAGCCAGATTGGCACTAGAACGAAAAACAGGTGCACGAGGCCTCCGGTCCATAATGGAAAAGCTGTTACTAGAACCAATGTTCGAAGTCCCTAATTCTGATATTGTATGTGTGGAGGTTGACAAAGAAGTAGTAGAAGGAAAGAAGGAACCAGGATACATCCGGGCTCCAACGAAAGAATCCTCTGAAGAGGAGTATGACTCTGGAGTTGAGGAAGAAGGATGGCCTCGTCAAGCAGATGCTGCAAACAGCTGA

Related Sequences

bmy_12706T0 Protein

Length: 599 aa      View alignments
>bmy_12706T0
MSGCGACTCGATAARLISSSLASAPRGISCGRIHIPVLGRLGTFETQLLRRAPFRAFTETPAYFASKDGMSKDGSGDGNKKSASEGSSKKSGSGNSGKGGNQLRCPKCGDLCTHVETFVSSTRFVKCEKCHHFFVVLSEADSKKSIIKEPESAAEAVKLAFQQKPPPPPKKIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANVRQQAEVEKQTSLTPRELEIRRREDEYRFTKLLQIAGISPHGNALGASMQQQVNQQIPQEKRGGEVLDSSHDDIKLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPEKNSRKLRGETVQVDTTNILRAAAAADLANRSGESNTHQDIEEKDRLLRHVEARDLIEFGMIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIARLALERKTGARGLRSIMEKLLLEPMFEVPNSDIVCVEVDKEVVEGKKEPGYIRAPTKESSEEEYDSGVEEEGWPRQADAANS*